Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4838 ATGACAGATCGTGTCTACCCTGCCGCCAAACCCACCACCAACGGCAACGGTAACGGTAACGGTAATGGTGTCTCCGCCGCCAACCCATCTTTTCCAGCCACAAAAGCTCAACGCTACGGTGCAACCCGTCCTACTTACCGTCCTCAACCTTATCACCGCCGTAGCCGTCGCCGTTGCTGTTGCACTTTCTTTTTCTGGCTTTTTCTAATCATCCTCATCCTCCTCTTCATCGTCGGTGTCATCGGCACCGCTTTCTACCTAATCTACCGTCCCCACCGTCCTTCTTTCACCGTCACATCTCTCAAACTTTCATATTTCAATCTCACTTCTTCTTCAACTCTCAACTCAAAATTCAACATCGACATCACAGCAAAAAACCCAAACAAAGACATAATCTTTGTTTACCAACCAACCACCATTTCAATTCTCTCCGGCGATATCGATGTCGGCGACGGAACAATACCTTCTTTCAACCATGGGAAAAAGAACACTACTCTTTTAAAAGCTTCGATTTTGAGCAACGGAGAATCACTAGAAACTGATTCTGCTTCAGAGCTGAAGAAGAACATGAAGAGCAAAAATGGGTTACCGTTGAAAGTGAAATTGGATACGAAAGTGAAAGCGAAAATGGGAAAATTGAAAACACCTAACGTTGGAATTAGAGTTTCTTGCGACGGAATTAGAGTTCATTTACCCGTCGGTAAAAAACCAGCGACGGCGTCAACTTCTAACGTTAAGTGTAACGTTGATGTGAGGTTTAAGATCTGGAAATGGACTGTTTAA 783 0.4444 MTDRVYPAAKPTTNGNGNGNGNGVSAANPSFPATKAQRYGATRPTYRPQPYHRRSRRRCCCTFFFWLFLIILILLFIVGVIGTAFYLIYRPHRPSFTVTSLKLSYFNLTSSSTLNSKFNIDITAKNPNKDIIFVYQPTTISILSGDIDVGDGTIPSFNHGKKNTTLLKASILSNGESLETDSASELKKNMKSKNGLPLKVKLDTKVKAKMGKLKTPNVGIRVSCDGIRVHLPVGKKPATASTSNVKCNVDVRFKIWKWTV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4838 260 MobiDBLite consensus disorder prediction 7 22 - -
Tpr7g4838 260 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g4838 260 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 14 259 - -
Tpr7g4838 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 259 - -
Tpr7g4838 260 Pfam Late embryogenesis abundant protein 122 224 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4838 Tpr-Chr7 56349528 56350876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4838 31 248 EF-hand Containing Proteins AT5G21130 24.091 1.03e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4838 - - mtr:MTR_2g100060 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4838 7 56349528 56350876 Tpr5g2381 5 45415763 45416721 PCT