Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2381 ATGGCAAACAATAACCATATCCACCCTCAAGCCAAGTCCACCCCTAACGGCGGTGCAGCCACCGTTAAGCCCTCATTCCCCGCCACAAAAGCGCAAATCTACGGCGCCACTCGCCCGACCTACCGTCCACAAACCCACCACCGGCGCCGTAGCAACCGTAATTGGTGTTGCACCATTTGTTGTTGGCTTATACTCATCCTCATCTTCATCCTCATCCTCCTCGGAGTCGCTGGCACCGTCGTCTACCTCCTCTACCATCCGCAACGTCCATCCTTTTCCGTTACCTCACTTAAACTCACCTCATCTGAGTTTGATTTCACTCTTTCCACCACCAACCCAAATGATAAAATCACATTTTCATACCAACCGATCTCTATTTCTCTTCTCGCCAATGGGCTCGACGTTGGAGACGGCGTTATTCCGTCGTTCGATCATGGAACGAAGAATACTACAATGCTGAAAGCATCTGTTGAGAGGAAGAGTATTAAAAGGAAGTCATTGGAATTGAAGATGAAGATGGAGACTAAAGTTGAGGCTAAGATGTGGGTTTTTAAGACACCACGTGTCGGAATAAGTGTGTTGTGTGACGGCATTGATGTCTCCGGCGAGAAAGTGACGGCGGCCGGGGAGAAGTGTGAGGTGGATGTTAGGTTCAAGGTATGGAAATGGACTCTTGGATGA 681 0.4919 MANNNHIHPQAKSTPNGGAATVKPSFPATKAQIYGATRPTYRPQTHHRRRSNRNWCCTICCWLILILIFILILLGVAGTVVYLLYHPQRPSFSVTSLKLTSSEFDFTLSTTNPNDKITFSYQPISISLLANGLDVGDGVIPSFDHGTKNTTMLKASVERKSIKRKSLELKMKMETKVEAKMWVFKTPRVGISVLCDGIDVSGEKVTAAGEKCEVDVRFKVWKWTLG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2381 226 SUPERFAMILY LEA14-like 70 166 - -
Tpr5g2381 226 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 7 224 - -
Tpr5g2381 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 224 - -
Tpr5g2381 226 Pfam Late embryogenesis abundant protein 107 193 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2381 Tpr-Chr5 45415763 45416721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2381 30 181 EF-hand Containing Proteins AT5G21130 27.879 1.52e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2381 - - mtr:MTR_8g016370 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4838 7 56349528 56350876 Tpr5g2381 5 45415763 45416721 PCT