Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4802 ATGAATTTGCAACCCGGGCAGTCTAAGTCCTCTAATGGATATGGACGTCGTAAATCTGGAAGAGAAGTTGCAGCTAAGTCAGAGAATAAGATCCCATATGAAAATATAAATGTCAACCGGTTGGCAAGTACAGTTGTAGCAGGTGTGGTTACAGGCATTAAAGATGGCAGTTATGAGAGTGTTTCACATGATCGACTAGTATATGTCACGACATGTCTAATTGGGCTGCAGGTGGAAGTCCAGGTGAAAAATGGGTCTGTATACTCAGGAATATTTCACGCAATAAATACAGACAGTGATTTTGGAATCATTTTGAAAATGGCCCGCTTGACAAAGGATGCTTCATCACATGGGCAGAAGTCTGGTGCAGAATTTGTTATCAAGGCTCCTTCAAAGATTTTAATTATACCTGCCAAAGAACTTGTGCAAGTTATAGCACAGGGTGTTGCTCTTACTAGGGATGGCCTACCTAGTGAACCTCAGCACGATAGGTATCAGGAAATCATGGTTGACTCATTGATATCTCAATCTCATCATGCTGAGTTAGGAAGAGAACTAAAACCCTGGGTACCTGATGAAGATGATCCACAATGCCCTGAACTGGAAAATATCTTTGACGGCCACTGGAATAGGGGGTGGGATCAGTTTGAAACAAATAAGACATTGTTTGGGGTAAAAAGCACATTCAATGAGGAACTTTATACAACAAAGCTTGAAAAAGGGCCACTTACAAGAGAATTAGAAATGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGCGAGGAAACCCGAGATCTTCACCTTGCAGAGGAAAGAGGTCTTCACTTAGATGAAGACTTTGATATTGACGAAGAAACTAGATTTTCTTCGGTCTATAGGGGTACACATGATGATACATATGAGGAAGATGAAGACATACTGTTTGGTTCTCACAATTCTGAAACTTTTAATGGTATATTCGGTTCGGTCAATGAGAGGTATGGTGAAATAAATGGCGGAGAAGGCAATAATGGAGCTCCCACATTGGCAAATTCTTCCTCCATGGGTTACCCACAGTCATCTCAGTCAAGTTCTGGTGTAGATTTAAACTGTTCTAGTGCTTATGATCATGCTAAGCAATTTCTGTCTGAAATCCCTTCCAAAAGCTACTCATATTCGGATGGGGAAAGCAGGATTCAGGAGAACCTGGTTCATAATCTACATGGAGCCAGTGGTAACAACAGGGAAGAAAATCATATACATGGTCAGGATGTTCAACTGTCTAAAAATGAGGATTCACAAGCATCACTCTACTTGAAGAAAGATGACTTTGATAAAGGGATATTATCTCCTAATGCTAGCTCCTATGCCCCAGCTTCTCATATAATATCAAAATCTCATGAGAAGATGGGATCCCCCAGGGATTCTACCGAGGGTTTAGCACATGGTAAAGCTAATGACAGAACAAAGTATATAAACTCACGTGGAGCATCATCTTGGTCAGATCCTGTGAGAAGTGTGGCGGCATCTTCTGGTCCTGATTTATCTCCAAGTTCGTCAGTTGGTTCGTTGTCTTCTGAAAAATCGTCTTTGAATCCCAATGCAAAGGAATTCAAGCTCAACCCAAATGCAAAGAGTTTTATTCCATCACCTACTCGGTCTCCCAGTCCGGTGTCTGATAATTCCTTCTATTTTCAACCGAATGTAACTACTGTACCAAATATGCCAGCTGTGCCCATGAGTATTGGGATTGGACCTAATTTTTCCGGGCAACAACCTATCATGTATAATCCACAGGTATCCCAAATGCCAACTCAAGCATATTTTCATCCAAATGCACCGCAGTACGGACAGCTTCTTGGTCATCCTAGGCAAGCTTTATACATGCCGCCGAGTTACCAACCTGAAATGCAATACAAGGGACGTGATTATTGA 1914 0.4148 MNLQPGQSKSSNGYGRRKSGREVAAKSENKIPYENINVNRLASTVVAGVVTGIKDGSYESVSHDRLVYVTTCLIGLQVEVQVKNGSVYSGIFHAINTDSDFGIILKMARLTKDASSHGQKSGAEFVIKAPSKILIIPAKELVQVIAQGVALTRDGLPSEPQHDRYQEIMVDSLISQSHHAELGRELKPWVPDEDDPQCPELENIFDGHWNRGWDQFETNKTLFGVKSTFNEELYTTKLEKGPLTRELEMQALRIAREIEGEETRDLHLAEERGLHLDEDFDIDEETRFSSVYRGTHDDTYEEDEDILFGSHNSETFNGIFGSVNERYGEINGGEGNNGAPTLANSSSMGYPQSSQSSSGVDLNCSSAYDHAKQFLSEIPSKSYSYSDGESRIQENLVHNLHGASGNNREENHIHGQDVQLSKNEDSQASLYLKKDDFDKGILSPNASSYAPASHIISKSHEKMGSPRDSTEGLAHGKANDRTKYINSRGASSWSDPVRSVAASSGPDLSPSSSVGSLSSEKSSLNPNAKEFKLNPNAKSFIPSPTRSPSPVSDNSFYFQPNVTTVPNMPAVPMSIGIGPNFSGQQPIMYNPQVSQMPTQAYFHPNAPQYGQLLGHPRQALYMPPSYQPEMQYKGRDY* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4802 637 Gene3D - 70 140 - -
Tpr7g4802 637 SMART LsmAD_2 223 294 IPR009604 -
Tpr7g4802 637 MobiDBLite consensus disorder prediction 460 482 - -
Tpr7g4802 637 MobiDBLite consensus disorder prediction 484 547 - -
Tpr7g4802 637 Pfam Ataxin 2 SM domain 63 146 IPR025852 -
Tpr7g4802 637 PANTHER ATAXIN 2-RELATED 7 631 IPR045117 GO:0003723
Tpr7g4802 637 Pfam LsmAD domain 223 293 IPR009604 -
Tpr7g4802 637 PANTHER ATAXIN-2 HOMOLOG 7 631 - -
Tpr7g4802 637 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g4802 637 MobiDBLite consensus disorder prediction 457 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4802 Tpr-Chr7 56063656 56072393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4802 - - gmx:100782491 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4802 7 56063656 56072393 Tpr7g4802 7 56063656 56072393 ECH
Tpr7g4802 7 56063656 56072393 Tpr5g2294 5 44024768 44032000 PCT