Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4793 ATGAACAATAACAACGACAACAACAGCAACAAAGACACTACCATAGGAGTCCTCGATTCTCGATTCAATCAAACCCTCAGAAATGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGTAAAATATTATTGAGCCAAAGAGTAGATCCTATAGATAATTCAACCTTATACTCGCCAACTTACAGCAGGAGTTCCTCATACAACGATACTGGCACTAATGATCGCAAAATTGAGACAGTAGAGGAGGAAGTTCACAGTGGAAGCAAACCATTTAGTACTCCTAATGATAATAAATTGAAAACATCAACCTCCCGTGTAGAGAACCCGTCTGAAGAAGTCCGGAAATCTTCCATGGGTGGTAGAGCTACTGATTCTGCTAGAGTTATGAAGTTCACAAAGGTTCTTTCTGGAACCATGGTTATATTGGACAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGGCTCGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGATACAGAACGCTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGAAGTTCCCTTCTTCCAGCAACCACAAGTTCAGAAATCACTGGAGCGTATTCTTTACGCATGGGCCATTCGGCATCCAGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTCACACCATTTTTTGTTGTTTTCCTATCAGAATACTTAGAAGGGAGCATAGATAATTGGACAATGTCTGATTTATCTTCAGATAAAATCTCTAATGTAGAAGCTGACTGTTATTGGTGCTTGTCAAAATTACTTGATGGTATGCAAGACCATTACACGTTTGCTCAACCAGGAATTCAAAGGCTTGTCTTTAAGTTGAAGGAATTAGTCAGGAGGATTGACGATCCTGTTTCAAGCCATATGGAGAATCAGGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCAACTTGTCACACGCCTTTGGGATACATATCTAGCCGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTTACGTGGTCAGACGAAATTCAGAAGCTTGATTTTCAAGAGTTAGTAATGTTCCTTCAACGCCTTCCAACTCAGAACTGGACTGACCAGGAGCTCGAGATGGTACTCTCTCGTGCATTTATGTGGCACAGCATGTTCAACAATTCTCCTAGCCATTTAGCTACCTAA 1350 0.4156 MNNNNDNNSNKDTTIGVLDSRFNQTLRNVQGLLKGRSIPGKILLSQRVDPIDNSTLYSPTYSRSSSYNDTGTNDRKIETVEEEVHSGSKPFSTPNDNKLKTSTSRVENPSEEVRKSSMGGRATDSARVMKFTKVLSGTMVILDKLRELAWSGVPDYMRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLDCVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPEVPFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSSHMENQGLEFLQFAFRWFNCLLIREIPFQLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDEIQKLDFQELVMFLQRLPTQNWTDQELEMVLSRAFMWHSMFNNSPSHLAT* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4793 449 Pfam Rab-GTPase-TBC domain 156 401 IPR000195 -
Tpr7g4793 449 Gene3D - 314 449 - -
Tpr7g4793 449 Gene3D - 129 180 - -
Tpr7g4793 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 315 437 IPR035969 -
Tpr7g4793 449 MobiDBLite consensus disorder prediction 86 104 - -
Tpr7g4793 449 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 3 446 - -
Tpr7g4793 449 MobiDBLite consensus disorder prediction 82 121 - -
Tpr7g4793 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 188 313 - -
Tpr7g4793 449 SMART tbc_4 149 405 IPR000195 -
Tpr7g4793 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 3 446 - -
Tpr7g4793 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 129 339 IPR035969 -
Tpr7g4793 449 ProSiteProfiles TBC/rab GAP domain profile. 152 379 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4793 Tpr-Chr7 56022429 56027535 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4793 K20360 - gmx:100785695 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4793 7 56022429 56027535 Tpr7g4793 7 56022429 56027535 ECH
Tpr7g4793 7 56022429 56027535 Tpr3g2223 3 20838298 20849745 PCT