Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4627 ATGGCATCATCCTTAAGGTTCCTCAAAATGTGTCTCTCTCTTTTAATGATGTTTTTCTTTCTCATCATGTTCATTTCACCTTCATTCTCATCTTCAACTTGTTCCAAAAACAATGACACTCTCCTTTCTTCAAAATTAACAGCAGAAAATCTCATAAGAGGACTTAATCTTTTTCCAAAACATTCCATAAATATACCAAAGAATGATCCTCATCATTTTGTTCATGGAAACATTGTTGAGAAGAAGTTCACTTTCCCTGGTTTTGTTGACTCTGATCCTTCTGTTGAAGAACTTGGTCATCATGCAGGGTATTATAGTCTTCCTCATTCCAAAGCTGCAAGGATGTTCTATTTTTTCTTTGAATCTCGAAACAGTAAGGATGATCCTATTGTCATATGGTTAACCGGAGGTCCAGGATGTAGCAGTGAAATTGCTTTGTTTTATGAAAATGGTCCTTTTCAGTTTTCTAAGGAGAACAAATTGTCCCTTGTTTGGAATCAATATGGATGGGACGCGGCATCAAATATTATATTTGTAGACCAACCCATAGGAACAGGTTTCAGCTATACTACTGATGATAGTGATGTTCGACATGACGAAGATGGAGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAATTCACTAAGAATGATTTTTATATTACTGGAGAATCATATGCTGGACATTACATTCCAGCTTTTGCATCCAGAGTTCACCAAGGAAACAAGGCAAATGAAGGAATTCATATAAATCTAAAGGGCTTTGCTATTGGGAATGGATTAACCAATCCTGAAATTCAATACAATGCATATACAGATTATGCATTAGACAATGGACTTATTAATAAGGAAGAACATGACGATATCAACAAGTTGTTCCCAGAATGTCAAAAGGGCATAGAAGATTGTGGCACCGAAGGTGGAGACGCGTGCATAACTTCAAGAAGTAATTGCATTAAAATATTCAATCGGATCATGAACATCGCCGGCAACATTAATTACTACGACATCAGAAAGAAATGTGGGGGAGGCCTTTGTTATGACTTCAACAAGGTAGAAACATTCTTGAACTTGAAGACAGTAAGGGAAGCTTTAGGTGTTGGGGACTTGGAATTTGTTTCTTGCAGTGGCACAGTATACAATGCCATGTTGGAGGATTGGATGAAAAATCTAGAAGTTGGTATTCCAGCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCTGGAGAATATGATCTCATATGCAATTGGCTTGGGAATTCGAGGTGGGTTGATGCCATGAATTGGTCAGGTCAAAAAGAATTTACAGCGTCTCCTACAACCCCTTATTTGGTTGATAGTGAAGAAGCAGGAATTCTAAAAAGCCACGGACCTCTAGCTTTCCTCAAGGTGAAAGATGCTGGTCACATGGTTCCTATGGATCAACCAAAAGCAGCACTTGAGATGTTAAAAGATTGGATGCAAGGGAAACTAGTAAGGACAAGTTGA 1512 0.3823 MASSLRFLKMCLSLLMMFFFLIMFISPSFSSSTCSKNNDTLLSSKLTAENLIRGLNLFPKHSINIPKNDPHHFVHGNIVEKKFTFPGFVDSDPSVEELGHHAGYYSLPHSKAARMFYFFFESRNSKDDPIVIWLTGGPGCSSEIALFYENGPFQFSKENKLSLVWNQYGWDAASNIIFVDQPIGTGFSYTTDDSDVRHDEDGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPAFASRVHQGNKANEGIHINLKGFAIGNGLTNPEIQYNAYTDYALDNGLINKEEHDDINKLFPECQKGIEDCGTEGGDACITSRSNCIKIFNRIMNIAGNINYYDIRKKCGGGLCYDFNKVETFLNLKTVREALGVGDLEFVSCSGTVYNAMLEDWMKNLEVGIPALLEDGIKLLVYAGEYDLICNWLGNSRWVDAMNWSGQKEFTASPTTPYLVDSEEAGILKSHGPLAFLKVKDAGHMVPMDQPKAALEMLKDWMQGKLVRTS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4627 503 Pfam Serine carboxypeptidase 97 497 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
Tpr7g4627 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 467 484 IPR033124 GO:0004185
Tpr7g4627 503 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 40 498 - -
Tpr7g4627 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 467 480 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 498 IPR001563 GO:0004185|GO:0006508
Tpr7g4627 503 Gene3D alpha/beta hydrolase 78 502 IPR029058 -
Tpr7g4627 503 SUPERFAMILY alpha/beta-Hydrolases 99 498 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4627 Tpr-Chr7 54692240 54695598 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4627 K16298 - gmx:100785987 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4627 7 54692240 54695598 Tpr7g4627 7 54692240 54695598 ECH
Tpr7g4627 7 54692240 54695598 Tpr4g1648 4 16887404 16891366 PCT