Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1648 ATGGGATTCTCCAAAACCTTTCGGTCTCTTTTGTTATTGTTCATTTTATGTTCTTTATATACAATTTCTCGCATCATACAATATCAGCATTTTCTATCAATAACAAACTTTTCACCAAATCAACGAGCTGAAAGGCTTATAAGAAGCCTTAACTTGTTCCCGAAGGATCCAGTTACTATAGTACATGATGATCACTCTGTTGATTTTGTTCCTGGAAAGATTGTGGAGAAGAAGTTTTCGTTTTTTGGTGATTCTGATGGACTTTCTGTTGAAAATCTTGGTCATTATGCTGGATACTATTCGCTTCCTCGTTCAAAAGCGGCAAGGTTGTTCTATTTTTTCTTTAAATCACGAAATAGTACTAATGATGACCCAGTTGTCATATGGTTGGCAGGAGGTCCAGGTTGTGGGGGTGAAATAGCTGTGTTTTATGAGAATGGTCCTTTTCTAATTGCCAATAACATGTCTCTTGTATGGAATGACTATGGCTGGGATAAGGCATCAAATATTATTTTCATTGACCAACCCATTGGGACAGGTTTCAGCTATGCTAATGATGTTAATGATATTCCACATGATCAAGGTCTTGTTAGTAATGATTTGTACCACTTCTTGCAGGAATTTTTCAAGCAGCACCCTGAGTTTATTAAGAATGACTTTTATATTACTGGAGAATCGTATGCTGGACACTTTGCTCCAGCTCTTGCATCCCGAATTCACGAAGGAAATAAAGACAACAAAGGAATTACTATAAACCTCAAGGGTTTCGCTGTTGGGAATGGATTGATCAACCCAAGAATTCAGTACCCAACATACATGCAATATACATTTGATATGAAATTGATTACAAAGAAGGAAGATCAAGAACATCTCAACAAGTTGATCCTGCAGTGTGAGGATGGCATTAAAAATTGCGAGAATGAAGGTAAAGAAAGTTGTTTGTTAGCCTTCAAACAATGTGATATAATGAATAATATCTTGGCCATTGCTGGCAACATCAATTACTTTGACATCAGAAAAACATGCGACGGACCATTGTGTTATGACTTCTCAAAGATGCATACATTTCTAAATCAGAAGAAGGTAAGGGATGCTTTAGGTGTTGGGGACTTGGAGTTTTTTATATGCAGTGACAAAGTGTATGATGCTATGAAGGAAGATTGGATGAGAAACCTTGAAGCAGATATTCCTGCACTTCTTGAAGATGGAATCAAAGTTCTTGTATATGCAGGTGAATTTGATCTTGCTTGCAATTGGCTTGGGATTTCAAATTGGGTTCATGCCATGGAGTGGTCAGGTCAAAACCAGTTTGTGGCGTCCAAATCAGTTCAATTTTTGGTTGATGGTAGAAAAGCAGGGTTGTTGAAAAGCTATGGACCTCTATCTTTTCTAAAGGTGAATGGGGCAGGACATATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGGTCAACTGGATGCAAGGGACACTTAATGAGACAACGTTTAATGTCTCTCTTTCTTGA 1512 0.379 MGFSKTFRSLLLLFILCSLYTISRIIQYQHFLSITNFSPNQRAERLIRSLNLFPKDPVTIVHDDHSVDFVPGKIVEKKFSFFGDSDGLSVENLGHYAGYYSLPRSKAARLFYFFFKSRNSTNDDPVVIWLAGGPGCGGEIAVFYENGPFLIANNMSLVWNDYGWDKASNIIFIDQPIGTGFSYANDVNDIPHDQGLVSNDLYHFLQEFFKQHPEFIKNDFYITGESYAGHFAPALASRIHEGNKDNKGITINLKGFAVGNGLINPRIQYPTYMQYTFDMKLITKKEDQEHLNKLILQCEDGIKNCENEGKESCLLAFKQCDIMNNILAIAGNINYFDIRKTCDGPLCYDFSKMHTFLNQKKVRDALGVGDLEFFICSDKVYDAMKEDWMRNLEADIPALLEDGIKVLVYAGEFDLACNWLGISNWVHAMEWSGQNQFVASKSVQFLVDGRKAGLLKSYGPLSFLKVNGAGHMVPMDQPKAALQMLVNWMQGTLNETTFNVSLS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1648 503 Gene3D alpha/beta hydrolase 84 500 IPR029058 -
Tpr4g1648 503 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Tpr4g1648 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Tpr4g1648 503 Pfam Serine carboxypeptidase 92 491 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 493 - -
Tpr4g1648 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 493 IPR001563 GO:0004185|GO:0006508
Tpr4g1648 503 SUPERFAMILY alpha/beta-Hydrolases 93 492 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1648 Tpr-Chr4 16887404 16891366 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1648 K16298 - qsu:112023425 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4627 7 54692240 54695598 Tpr4g1648 4 16887404 16891366 PCT