Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4621 ATGACTAAGAAGAAAAACAAAAACAACAACAACACCACCAACGATGCTCAAAACGAAAACAAAGAATCAAACAACAACAACAACAACAGCAACAGCAACAAGAAGGAAGATGAAACCAAGGCAACAAAAATTGTTATGAAGATCGACATGCATTGTGAAGGATGTTCTTCCAAAATCATCAAATGCATCGCTGGTTTTGAAGGCGTGGAGAAAATAGATAAAGGAGATGGAACCGGAAAACTAACCATCACCGGCAACATTGACGCCGCAAAACTCAGAGATAAGCTTGTTAGTAAAACCAAGAAGAAAGTTGAAGTTATTTCTCCTCCTCTCAAGAACAATGACAAGGAGAACAAAAAATCTGACAACAAAAACAACAAACCTGATGAAAAAAAACCCAAAGAGCTTCCGTTTACAACGGTGACTTTGAAGATGGAGCTGCATTGTCCAGGATGTATTGAGAGAATTCGCAAAACTGTGTCGAAAGCAAAAGGTGTTAATCATGTGGCAATTGATAAGGAGAAGGAGACATTGACTGTGAAAGGGACAATGGATGTGAAAGTTTTGATGGAGAAATTGAAGAAGAGGTTTAAGAGGAAGATTGAGGTGGTCCAACCCAAGAAGGAGAAGGAGAAGGATAAGGATAAGGACAAGGAGAATGAGAAAGAAGGTAACAAAGGAGAGAAAGCAGAGAATGATGGTGGCAAGAAGAATAATCAGAATCAGAAAGGAGGTGAAGGTGGAAACAAAAAAGGTGATGCTAATGTTGGTGGTGACAACAATGCAAAAATGGAGGTTTCATCATCTGGTTATGGTTATGGATATGGCTTTTGGGGATTGGATTATAACAACTATGGACAAGTTCAAATGATGCAAATGCAACAAGCACCACAAATGTTCAGTGATGAAAATCCAAATGCTTGTTCTATTATGTGA 936 0.3857 MTKKKNKNNNNTTNDAQNENKESNNNNNNSNSNKKEDETKATKIVMKIDMHCEGCSSKIIKCIAGFEGVEKIDKGDGTGKLTITGNIDAAKLRDKLVSKTKKKVEVISPPLKNNDKENKKSDNKNNKPDEKKPKELPFTTVTLKMELHCPGCIERIRKTVSKAKGVNHVAIDKEKETLTVKGTMDVKVLMEKLKKRFKRKIEVVQPKKEKEKDKDKDKENEKEGNKGEKAENDGGKKNNQNQKGGEGGNKKGDANVGGDNNAKMEVSSSGYGYGYGFWGLDYNNYGQVQMMQMQQAPQMFSDENPNACSIM* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4621 311 MobiDBLite consensus disorder prediction 205 236 - -
Tpr7g4621 311 SUPERFAMILY HMA, heavy metal-associated domain 138 195 IPR036163 GO:0046872
Tpr7g4621 311 ProSiteProfiles Heavy-metal-associated domain profile. 147 195 IPR006121 GO:0046872
Tpr7g4621 311 Gene3D - 40 113 - -
Tpr7g4621 311 Gene3D - 139 211 - -
Tpr7g4621 311 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 311 IPR044594 GO:0046872
Tpr7g4621 311 Pfam Heavy-metal-associated domain 45 102 IPR006121 GO:0046872
Tpr7g4621 311 Pfam Heavy-metal-associated domain 146 197 IPR006121 GO:0046872
Tpr7g4621 311 MobiDBLite consensus disorder prediction 103 137 - -
Tpr7g4621 311 Coils Coil 6 33 - -
Tpr7g4621 311 MobiDBLite consensus disorder prediction 1 32 - -
Tpr7g4621 311 CDD HMA 50 105 IPR006121 GO:0046872
Tpr7g4621 311 SUPERFAMILY HMA, heavy metal-associated domain 42 104 IPR036163 GO:0046872
Tpr7g4621 311 CDD HMA 147 195 IPR006121 GO:0046872
Tpr7g4621 311 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 4 311 - -
Tpr7g4621 311 MobiDBLite consensus disorder prediction 1 39 - -
Tpr7g4621 311 MobiDBLite consensus disorder prediction 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4621 Tpr-Chr7 54631319 54632801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4621 - - mtr:MTR_2g095480 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4621 7 54631319 54632801 Tpr7g4621 7 54631319 54632801 ECH
Tpr7g4621 7 54631319 54632801 Tpr4g1652 4 16941552 16943370 PCT