Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1652 ATGGGGAAGAAGAAAAATAAGAGTAATGGAGGAGAAAACAACAACAATGGAGGAAATGAAGAAAACAACAACAATGGAGGAAAGGAAGAAAACAACAATGGCGGAAATAAGGAAAACAACAACAACAACAACACAATGATCTTGAAAGTTCATATGCATTGTGACGGTTGTGCTTCCAAAATCACCAAATACCTTCACTCAATCAAAGGTGTTGAAACGGTGAAAACAGAGAGTGAGACCGGAAAAGTAACCGTCACCGGTAAAGTGGACCCCACAAAAGTGAGGGATAATCTTGCAGAGAAGACAAAGAAGAAAGTTGAACTTATTTCTCCACAACCTAAAAAGGAGAAAGAGAATAACAAGAAGGAAAATGAACCAAACAATAACAAATCTGATGACAAAAAAACCAAAGATAATAAAGAGTTGATTACTACTTCTGTTTTGAAAATGGTACTACACTGTCAAGGTTGTATTGACAAGATTGAAAAGATTGTGATGAAAACTAAAGGGGTTATTGATATGAAGATAGACAAAGAGAAGAATAATGTGACTGTTAAGGGTACAATGGATGTGAAAGGACTAGTTGAGAATTTATCAGAGAAGCTTAAGAAGAAAGTTGAGGTTGTCCCTCCTAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGATGGTGGTGGAGGAGGGAAGAAAAAGAACAAGGGTGGTGGTGGTGGAGGAGGAGGAGAAGAAGGGGGAGATAATGGTAACAATGGAGGAGGAGAAGTTAAAATGATGGAGCATTTGGTTCAAGTTCAACCACCATATGGTTTTGGTTATGGAAATGTTGAGGGATATAATGGACAAGTTTACCAAGAGTTGATACATTTTCATATGAATTCACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCATGCATTGTCATGTGA 930 0.3785 MGKKKNKSNGGENNNNGGNEENNNNGGKEENNNGGNKENNNNNNTMILKVHMHCDGCASKITKYLHSIKGVETVKTESETGKVTVTGKVDPTKVRDNLAEKTKKKVELISPQPKKEKENNKKENEPNNNKSDDKKTKDNKELITTSVLKMVLHCQGCIDKIEKIVMKTKGVIDMKIDKEKNNVTVKGTMDVKGLVENLSEKLKKKVEVVPPKKDKEGGGGGDGGGGGKKKNKGGGGGGGGEEGGDNGNNGGGEVKMMEHLVQVQPPYGFGYGNVEGYNGQVYQELIHFHMNSQPPQMFSDENPNACIVM* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1652 309 MobiDBLite consensus disorder prediction 94 138 - -
Tpr4g1652 309 CDD HMA 48 107 IPR006121 GO:0046872
Tpr4g1652 309 ProSiteProfiles Heavy-metal-associated domain profile. 152 207 IPR006121 GO:0046872
Tpr4g1652 309 MobiDBLite consensus disorder prediction 7 37 - -
Tpr4g1652 309 Gene3D - 41 117 - -
Tpr4g1652 309 Gene3D - 141 216 - -
Tpr4g1652 309 MobiDBLite consensus disorder prediction 1 37 - -
Tpr4g1652 309 SUPERFAMILY HMA, heavy metal-associated domain 45 107 IPR036163 GO:0046872
Tpr4g1652 309 CDD HMA 152 207 IPR006121 GO:0046872
Tpr4g1652 309 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 20 309 - -
Tpr4g1652 309 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 20 309 IPR044594 GO:0046872
Tpr4g1652 309 ProSiteProfiles Heavy-metal-associated domain profile. 52 100 IPR006121 GO:0046872
Tpr4g1652 309 Pfam Heavy-metal-associated domain 49 105 IPR006121 GO:0046872
Tpr4g1652 309 Pfam Heavy-metal-associated domain 152 206 IPR006121 GO:0046872
Tpr4g1652 309 MobiDBLite consensus disorder prediction 205 244 - -
Tpr4g1652 309 MobiDBLite consensus disorder prediction 205 219 - -
Tpr4g1652 309 SUPERFAMILY HMA, heavy metal-associated domain 144 207 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1652 Tpr-Chr4 16941552 16943370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1652 - - mtr:MTR_4g057765 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1652 4 16941552 16943370 Tpr4g1652 4 16941552 16943370 ECH
Tpr7g4621 7 54631319 54632801 Tpr4g1652 4 16941552 16943370 PCT