Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4588 ATGCTTTCAAAGGCTTCAACAATTGCAATGCCCACTTTTTATTCCTCTAGGGTAAGAGCTGGGTTTAGTGTGTGGCCTAATGTGAGGCAACTTTGCTTTAGAAAAGGAGTTTTGTATGGATTTATGCGACTTTTTTCTACTCCATATAAAACACTGCGTGGAGGAGCTAGTCGTTCACTCAAAGTGGCTCGGTTTTGCAGTGTTGCGAATATGTCTTCCTCTTTGCAGATTGAATTGGTACCTTGTCTGAGTGACAATTATGCATACATTTTACACGATGTTGATACGGGCACAGTTGGAGTTGTTGATCCTTCTGAAGCTTCGCCTGTCATAGATGCATTGAGCAAGAAAAATCGGAACTTGAATTACATACTCAACACTCACCATCACCATGATCACACTGGTGGAAATGTAGAACTAAAAGCAAGATATGGGGCAATGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCAGGCATTGATATCCATTTGAAGGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATCGACACACCTGGTCACACTCGAGGTCACATAAGCTTCTACTTTCCGGGATCTGGAACAATCTTTACAGGGGACACTTTGTTCAGCTTATCATGCGGCAAACTCTTTGAAGGAAGCCCTGAACAGATGCAATCTTCTCTTAGAAAGATCACGTCTTTACCAGACGATACAAGTATATACTGTGGACACGAGTACACATTGAATAATACAAAGTTTGCATTGGCGGTAGAACCTGAAAACAAGGCACTTCAATCCTATGCTGCCCATGTGACAAACCTTCGAAGTAAAGGCTTGCCCACGATTCCAACCACACTGAAGTTAGAAAAGGCTTGCAATCCATTTCTTCGTACATCCAGTGCCCAAATCCGGAAATCGTTAAACATTCCAGTCACAGCAGATGATGCAGAAGCCCTGGGGATCATCCGGCAAGCAAAGGATGATTTTTAG 987 0.4306 MLSKASTIAMPTFYSSRVRAGFSVWPNVRQLCFRKGVLYGFMRLFSTPYKTLRGGASRSLKVARFCSVANMSSSLQIELVPCLSDNYAYILHDVDTGTVGVVDPSEASPVIDALSKKNRNLNYILNTHHHHDHTGGNVELKARYGAMVIGSGTDKERIPGIDIHLKDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSGTIFTGDTLFSLSCGKLFEGSPEQMQSSLRKITSLPDDTSIYCGHEYTLNNTKFALAVEPENKALQSYAAHVTNLRSKGLPTIPTTLKLEKACNPFLRTSSAQIRKSLNIPVTADDAEALGIIRQAKDDF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4588 328 Gene3D - 75 328 IPR036866 -
Tpr7g4588 328 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 78 328 IPR017782 GO:0004416|GO:0019243
Tpr7g4588 328 Pfam Hydroxyacylglutathione hydrolase C-terminus 244 328 IPR032282 -
Tpr7g4588 328 Pfam Metallo-beta-lactamase superfamily 89 243 IPR001279 -
Tpr7g4588 328 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 1 328 - -
Tpr7g4588 328 SMART Lactamase_B_5a 85 243 IPR001279 -
Tpr7g4588 328 SUPERFAMILY Metallo-hydrolase/oxidoreductase 75 326 IPR036866 -
Tpr7g4588 328 CDD hydroxyacylglutathione_hydrolase_MBL-fold 80 243 IPR035680 -
Tpr7g4588 328 PANTHER BETA LACTAMASE DOMAIN 1 328 - -
Tpr7g4588 328 Hamap Hydroxyacylglutathione hydrolase [gloB]. 75 328 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4588 Tpr-Chr7 54329736 54333184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4588 K01069 - zju:107421782 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4588 7 54329736 54333184 Tpr3g2214 3 20749377 20753763 PCT