Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2214 ATGAGCGATATTAAGGGAAGAAGTGGGTTTTGTGCGTTGCCGTTGCCAGATGCCAGACAAATTTGCTTTAGAAAAGGTCTTCTTTATGGATTTTCGCGAGTCTTTTCTATACCATTGAAAACACTTCGTGGAGCTAGTCGATCACTGAGGGTAGATCAATTTTGCAGTGTAGTCAATATTTCTTCCTCATTAATGATTGAATTGGTTCCATGCCTAAGGGACAATTACGCATACCTTTTATACGATGTAGATACAGGGACTGTGGGTGTTGTTGATCCTTCTGAAGCTGCGCCAGTTATAGATGCTTTAACCAAGAAAAATCTAAATTTGACATACATACTGAATACGCACCACCATAATGATCACACTAATGGAAATGCAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCTGATGTAGACAAGGAAAGAATTCCTGGTATTGATATTTATTTGAGTGATGGAGATAAGTGGATGTTTGCTGGTCATGAGGTGCATATAATGGCCACTCCTGGTGTCACCCGAGGCCATATAAGCTTCCACTTTCCTGGATCTGGTGCAATTTTTACAGGAGACACCTTGTTCAGTTTATCATGTGGCAAGATCTATGAAGGAACCCCAGAACAGATGCTGTCTTCTCTTAAAAAGATCATGTCATTGTCAGATGATACCAGTATATATTGTGGTCATGAATATACATTGAATAATTCAAAGTTTGCATTGTCCATAGATCCTGAAAACAAGGAACTTCAATCTTATGCTTCACATGTAGCTCACCTTAGAAATAAAGGCTTGCCCACGGTTCCAACTACACTGAAGCTGGAAAAGGCTTGCAATCCATTCCTTCGCACCTGGAACACAGAAATCCGGCAAAAACTAAACGTTGCAGCCACTGCAGACGATGCAGAAGCCCTTGGTGTTATTCGACAAGCAGAGGATAAATTTTAG 954 0.4057 MSDIKGRSGFCALPLPDARQICFRKGLLYGFSRVFSIPLKTLRGASRSLRVDQFCSVVNISSSLMIELVPCLRDNYAYLLYDVDTGTVGVVDPSEAAPVIDALTKKNLNLTYILNTHHHNDHTNGNAELKERYGAKVIGSDVDKERIPGIDIYLSDGDKWMFAGHEVHIMATPGVTRGHISFHFPGSGAIFTGDTLFSLSCGKIYEGTPEQMLSSLKKIMSLSDDTSIYCGHEYTLNNSKFALSIDPENKELQSYASHVAHLRNKGLPTVPTTLKLEKACNPFLRTWNTEIRQKLNVAATADDAEALGVIRQAEDKF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2214 317 PIRSF Glx 59 317 IPR017782 GO:0004416|GO:0019243
Tpr3g2214 317 Gene3D - 64 317 IPR036866 -
Tpr3g2214 317 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 67 317 IPR017782 GO:0004416|GO:0019243
Tpr3g2214 317 CDD hydroxyacylglutathione_hydrolase_MBL-fold 69 232 IPR035680 -
Tpr3g2214 317 Hamap Hydroxyacylglutathione hydrolase [gloB]. 64 317 IPR017782 GO:0004416|GO:0019243
Tpr3g2214 317 Pfam Metallo-beta-lactamase superfamily 77 232 IPR001279 -
Tpr3g2214 317 SMART Lactamase_B_5a 74 232 IPR001279 -
Tpr3g2214 317 Pfam Hydroxyacylglutathione hydrolase C-terminus 233 317 IPR032282 -
Tpr3g2214 317 PANTHER BETA LACTAMASE DOMAIN 6 317 - -
Tpr3g2214 317 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 6 317 - -
Tpr3g2214 317 SUPERFAMILY Metallo-hydrolase/oxidoreductase 66 302 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2214 Tpr-Chr3 20749377 20753763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2214 K01069 - gmx:100805615 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4588 7 54329736 54333184 Tpr3g2214 3 20749377 20753763 PCT