Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4572 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGCCTGCGGTAACCTCTGTGTTTTTTGTCCTTCTTTGCGAGCAAGATCAAGACAACCTGTCAAACGTTACAAGAAGTTGATTGCCGATATTTTACCCCGTAATCAGGCTGCTGAACTCAATGATAGGAAAATCGGAAAGTTATGCGAGTATTCTTCTAAGAATCCATTGAGAATTCCCAAGATTACAGAGAACTTGGAGCAAAGATGTTACAAGGATTTGCGTAATGAAAACTTTGGTTCTGTGAAAGTTATCTTGTGCATATACAGAAAATTGCTGTCGTCATGTAAGGAGCAGATACCACTATTTGCCAGTAGTTTATTAGGGATCATTCGGACTCTTCTTGAGCAAACTCGAGCAGATGAAGTGCGGATCTTAGGTTGCAATACTCTTGTAGATTTTATTTATTTCCAGACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATCCCGAAACTATGTCAACTGGCTCAAGAAGTGGGAGATGATGAACGAGCTCTGCTTCTACGCTCAGCTGGATTACAAGCTCTATCTTCTATGGTAAAGTTCATGGGTGAGCACTCACATCTTTCCATGGATTTTGACAAAATTATATCAGCAGTTTTGGATAATTATATGGACCTTCAATCCAAATCCAACCTTGTCAACGTAGAGAAACTGAATTCACAATCTCAGAACCAATTGGTTCAAGAATTTCCTAAAGAAGAAGCCCATATATCTTCCGCATTGACTGTTGCGACAGGATTTGATACAGAGTCCAAGTTGGATAATGATAAGAATCCTGCTTATTGGTCAAAGGTTTGCTTGTATAATATAGCCAAGTTGGCAAAGGAAGCTACGACGGTGCGGCGTGTCCTGGAACCACTTTTTCATTATTTTGATACTGAGAATCACTGGTCTTCTGAAAAGGGGGTTGCTTATTGTGTTTTGATGTATTTGCAATCCCTTTTAGCTGAATCAGGAAATAACTCCCATCTTCTCTTGTCCATATTGGTCAAGCACTTGGATCATAAAAATGTTGCCAAGAAACCTATCCTTCAGATTGATATTATTAACATCACAACACAGGTTGCACACAATGTGAAGCAGCAAGCCTCAGTTGCACTCATTGGTGCAATATATGATCTCATTAAACATTTAAGGAAATGCCTACAAAATTCAGCTGAGGCTTCCGGCATTGGAAATGATGCATATAACTTAAATACTAAACTTCAATCTGCCATTGAAATGTGCATATTACAACTTTCAAACAAGGTTGGAGATGCAGGACCCATTCTTGATTTGATGGCTGTAGTGCTAGAGAATATTTCGAGTTCTACTATCATAGCAAGAACAACAATCTCTTCTGTCTATCAAACTGCAAAGATAATCACTTCCGTCCCTAATGTGTCGTATCACAAGAAGGCTTTCCCTGATGGGTTGTTTCATCAATTACTCCTGACCATGACTCATCTTGACCGTGAAACACAAATTGGAGCGCACAGTGTCTTCTCTGTGGTGCTTGTGCCATCCATGGTTTCTCCTTGGTTAGACCAAAAAATGATTGCTAAGAGGGTAGAGAGTGAAAGCCTCTCCATTCAGCGTGGAAGTTTTTCTAGAGCTGAGCACTTAAACGGGAAACTGGTAGAAGAAAAGGATCCAAGATCTCTTAGGTTGAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGCTGAAAATGGCCCTGCAAACTATGAGGCAATGGCGCACACTTATAGCATTGCTTTATTATTTACTCGTTCTAAGACATCCAGTTACATGGGTTTAGTAAGATGCTTCCAACTGGCATTTTCCCTCAGGAGCATATCTTTGGACCAAGAAGGAGGCTTACCACCATCTCGCAGGAGGTCCCTTTTATCCTTGGCTTCGCACATGCTTGTATTCTCTGCCAGGGCAGGCAATTTCCCTGATCTGATTCCCAAAGTCAAAGCATCCCTGACAGTAGATCCTTTTCTTGAATTGGTGGATGATACCCTGCTGCGGGCTGTTTGTCTAAAACCAGACAGGATAATTTATGGATCTGAGGCAGATGAAGTTGCTGCTATGAAGTCACTATCAGCTGTACAATTGGATGACAGACAGTTGAAAGAGACTGTAACATCATACTTTATGACTAAATTTTCAAAGTTGCCGGAGGATGATTTGTCCAGCATAAAAAATCAACTTCTACAGGGTTTTTCTCCTGATGATGCTTATCCATCGGGACCTCCATTGTTTATGGAGACACCAAGGCTAGGTTCTCCACTTGCTCAGATAGAGTTCCCTGATTTTGATGAGATAATGGCTCCAGGTGATTTGATGGATGAAGAACCTGAACAAAGTGGAAGCCAGTCAGATCGCAGAACATCACTTTCAACCAACTGTCCAGATGTTCTAGGTGTTAATCAACTCTTGGAATCGGTTTTGGAAACTGCTCGGCAAGTTGCAAGCGTATCCACTTCCTCAACTCCTTTACCTTATGACCAAATGAAGAACCAGTGTGAGGCCCTTGTAACAGGGAAACAACAGAAGATGTCAACCATTTACAGTTATAAGCACCAAGAGGAGACCAAGGCCATAGTTCTTTCAAGTGAAGATGAAGTAGAAGTTTCCCGTCAACCTGTTAAGGCACTAGAGTATTCAAAAGGCGATTTGAAGTTAGTAGCTCAGGAGCAATTTCAAGCACAGGATCACGTCCGCTTCCTTTCACACGACACTAGGCAGCATCATTCTTTGAGACTTCCACCTTCGAGCCCCTATGATAAATTTTTGAAAGCTGCAGGATGCTAA 2838 0.4168 MGVMSRRVVPACGNLCVFCPSLRARSRQPVKRYKKLIADILPRNQAAELNDRKIGKLCEYSSKNPLRIPKITENLEQRCYKDLRNENFGSVKVILCIYRKLLSSCKEQIPLFASSLLGIIRTLLEQTRADEVRILGCNTLVDFIYFQTDGTYMFNLEGFIPKLCQLAQEVGDDERALLLRSAGLQALSSMVKFMGEHSHLSMDFDKIISAVLDNYMDLQSKSNLVNVEKLNSQSQNQLVQEFPKEEAHISSALTVATGFDTESKLDNDKNPAYWSKVCLYNIAKLAKEATTVRRVLEPLFHYFDTENHWSSEKGVAYCVLMYLQSLLAESGNNSHLLLSILVKHLDHKNVAKKPILQIDIINITTQVAHNVKQQASVALIGAIYDLIKHLRKCLQNSAEASGIGNDAYNLNTKLQSAIEMCILQLSNKVGDAGPILDLMAVVLENISSSTIIARTTISSVYQTAKIITSVPNVSYHKKAFPDGLFHQLLLTMTHLDRETQIGAHSVFSVVLVPSMVSPWLDQKMIAKRVESESLSIQRGSFSRAEHLNGKLVEEKDPRSLRLSSHQVSLLLSSIWVQATSAENGPANYEAMAHTYSIALLFTRSKTSSYMGLVRCFQLAFSLRSISLDQEGGLPPSRRRSLLSLASHMLVFSARAGNFPDLIPKVKASLTVDPFLELVDDTLLRAVCLKPDRIIYGSEADEVAAMKSLSAVQLDDRQLKETVTSYFMTKFSKLPEDDLSSIKNQLLQGFSPDDAYPSGPPLFMETPRLGSPLAQIEFPDFDEIMAPGDLMDEEPEQSGSQSDRRTSLSTNCPDVLGVNQLLESVLETARQVASVSTSSTPLPYDQMKNQCEALVTGKQQKMSTIYSYKHQEETKAIVLSSEDEVEVSRQPVKALEYSKGDLKLVAQEQFQAQDHVRFLSHDTRQHHSLRLPPSSPYDKFLKAAGC* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4572 945 PANTHER CYCLIN-LIKE PROTEIN 1 945 - -
Tpr7g4572 945 SUPERFAMILY ARM repeat 77 456 IPR016024 -
Tpr7g4572 945 PANTHER PUTATIVE, EXPRESSED-RELATED 1 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4572 Tpr-Chr7 54196516 54206327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4572 K21842 - gmx:100806860 1451.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4572 7 54196516 54206327 Tpr3g2195 3 20540346 20551242 PCT