Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2195 ATGGGGGTTATGTCCAGGAGGGTTGTGCCCGTCTGTGGTAACCTTTGTTGTGTTTGTCCTGCTCTGCGTGCTAGCTCGAGACATCCGGTGAAGCGTTACAAGAAGTTGTTGGCTGATATTTTTCCTCGTAATCAGGAAGCTGAACTTAATGATAGAAAAATTGGAAAGCTATGTGACTATGCCTCTAAGAATCCATTGAGAATTCCTAAGATTACAGATAACTTGGAGCAAATATGTTACAAGGATTTGCGTAACGAAGTCTTTGGTTCAGTGAAAGTTGTCTTGTGCATATACAGAAAATTCTTATCGTCATGTAAGGAGCAGATGCCACTTTTTGCGGGTAGTTTATTAGAGATTATTCGGACTCTTCTAGAACAAACTCGAACAGATGAGATCAGGATCTTAGGCTGCAACACTCTTTTTGATTTTATAGATTGCCAGACAGATGGTACATACATGTTCAATTTAGAGGGTTTTATTCCTAAGCTATGTCAATTGGCTCAAGAAATGGGGGAAGATGAACGAGCTCTACGCCTACGTTCAGCTGGACTACAAGCTCTATCCTATATGGTGCGTTTCATGGGCGAGCAATCACATCTTTCTATGGACTTGGATGAAATCATGTTAGTGACTTTGGAGAATTACACGGGTCTCCAATCTAACTCCAATCCCCCCAAGGAATTTCCCAATGAGGATTGCTCTTTAACAGATACATCCAAGAAGGATCATTTGTGGCTGGAACTTGTGGCAGGGACTGGGATAGACTCTATGCTGGATACTGCTAAAGATCCGGCATATTGGTCAAAGGCTTGCTTGTATAATATGGTCAAACTGGCAAGGGAAGCTACAACTTTGCGGCGTGTCCTTGAACCTCTTTTTCATTATTTAGATACTCAAAATCAATGGTCTTCTGAAAAAGAAGAGGCTACCCGTGTTTTGATGTATTTACAATCTCTTTTAGAAGATTCAGGAGATAACTCCTATCTTCTGTTGTCTATTTTGGTCAAGCACTTGGATCACAAGAATGTTTCCAAGCAGCCTATCCTTCAGATAAATATTACTAACACCATATCACAACTTGCGCAAAATGTGAAGCAACGGGCTTCAGTTACAATAATTGGTGCAATATCTGACCTCATTAAACACTTAAGGAAGTGCCTACAAAATTTAGCTGCATCTTCCAGTTTTGGGAACAATGAGTATAAGTTGAATGCTGAACTTCAATCTGCCTTAGAAATGTGTATATTACAACTTTCAAACAAGGTTGGGGATGTAGGGCCCATCCTTGATTTGATGGCTGTGGTGTTAGAGAATATCTCAACTACAACCATTGTAGCAAGAACAACAATCTATGCTGTTTATCAAACTGCAAAGTTAGTTACATCGATCCCTAATGTGTCATATCACAAGAAGACTTTCCCTGATGCCTTGTTTCATCAACTGCTCCTGGTGATGGCTCATCCTGACGAAGAAACACGAATTGGGGCGCACAGTGTCTTTTCTACAGTGCTTATGCCATCTCTGTTTTCTACCCAGTTAGACCATAAAGCAAAGATGGCTCAGAAAGTATCAAGTGAGAGCTTCTCCATCCACCATGAAAGCTCTTTAGGGGCAGAACAGATCAATAGGAAACATGTGGAAGGAGGAGCAGTAGTTGATGTCAGCAGTAGGAAATATAGAGTTCTTCCATATCGTGTTCACAGCTTTTCCGGTGCTCTAAATCATGGGAAAGATGAGTTAAGTTCCTTCCGGTTAAGCAGCCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTATGGACAATGGCCCAGCAAATTTTGAGGCTATGGCTCACACTTTTAGCATTGCTTTATTGTTCACTCGTTCAAAGACATCCAGTTACATGGCTTTAGTAAGATGTTTCCAACTGGCATTCTCCCTCACGAGCATCTCACTGGACCAAGAAGGATGTTTACAACCATCTCGCAGGAGGTCTCTTTTTACCTTGGCATCGTACATGCTTATATTCTCTGCCAGGATAGGCAATTTCCCTGAGCTAATTCCAACAGTTAAAGCATCCCTGAGATATTCAACTGTAGATCCTTTTCTTGAGTTGGTCGATGATGTCAGGCTGCAGGCAGTTAATACAGAATCAGAGAAGATACTCTATGGTTCTCAAGAAGATGATGTTGCTGCTATTAAATCACTTTCAGCCATAGAATTGGATGATAAGCAGTTGAAAGAAACTGTAATCTCGTACTTCCTGACTAAATATTCAAAATTGCCAGAGGATGAGTTGTCAAGCATAAAGAAACAACTTGCACAGGGGTTTTCTCCTGATGATGCATATCCATTGGGACCTCCTTTATTTATGGAGACACCAAGGTCGTCATCTCCAATTGCTCAGATCGAGTTCCCAGATTTTGATGAGATTGTGGATTCGGTAGCTTTGATGGATGAAGAGACTGAACTTGAACCAATTAGAAGTCAGTCAAACTGCAAATCACCACTATCCTTCAATAACCTGGCCATTTTAAGTGTTAATCAACTCTTAGAATCGGTTCTGGAAACCGCATGGCAAGTCGCCAGTTTCCCCACTTCTGAAACTCACGTGCCATATGACCAAATGAAGAACCAGTGTGAGGCCCTTGTATCAGGGAAACAGCAGAAGATGTCCGTTCTTCACAGTTTTAAGCACCAGCAGGATACTAGAGCATTAGTCCTATCAAGTGCAATTGAAACCAAAGTTTCCCCTCTACCAATTAAGACACTCGAGTATTCAGAAGGTGATCTGAAGTTGGTGAGTCAGGAGCAAATACAGGCGCTGTATCCAGTACACCCATGTTCGTATGACTATAGGCAACATTCTTTGAGACTACCACCTGCGAGCCCCTATGATAAATTCTTGAAAGCTGCAGGATGTTAA 2919 0.4162 MGVMSRRVVPVCGNLCCVCPALRASSRHPVKRYKKLLADIFPRNQEAELNDRKIGKLCDYASKNPLRIPKITDNLEQICYKDLRNEVFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRTLLEQTRTDEIRILGCNTLFDFIDCQTDGTYMFNLEGFIPKLCQLAQEMGEDERALRLRSAGLQALSYMVRFMGEQSHLSMDLDEIMLVTLENYTGLQSNSNPPKEFPNEDCSLTDTSKKDHLWLELVAGTGIDSMLDTAKDPAYWSKACLYNMVKLAREATTLRRVLEPLFHYLDTQNQWSSEKEEATRVLMYLQSLLEDSGDNSYLLLSILVKHLDHKNVSKQPILQINITNTISQLAQNVKQRASVTIIGAISDLIKHLRKCLQNLAASSSFGNNEYKLNAELQSALEMCILQLSNKVGDVGPILDLMAVVLENISTTTIVARTTIYAVYQTAKLVTSIPNVSYHKKTFPDALFHQLLLVMAHPDEETRIGAHSVFSTVLMPSLFSTQLDHKAKMAQKVSSESFSIHHESSLGAEQINRKHVEGGAVVDVSSRKYRVLPYRVHSFSGALNHGKDELSSFRLSSHQVSLLLSSIWVQATSMDNGPANFEAMAHTFSIALLFTRSKTSSYMALVRCFQLAFSLTSISLDQEGCLQPSRRRSLFTLASYMLIFSARIGNFPELIPTVKASLRYSTVDPFLELVDDVRLQAVNTESEKILYGSQEDDVAAIKSLSAIELDDKQLKETVISYFLTKYSKLPEDELSSIKKQLAQGFSPDDAYPLGPPLFMETPRSSSPIAQIEFPDFDEIVDSVALMDEETELEPIRSQSNCKSPLSFNNLAILSVNQLLESVLETAWQVASFPTSETHVPYDQMKNQCEALVSGKQQKMSVLHSFKHQQDTRALVLSSAIETKVSPLPIKTLEYSEGDLKLVSQEQIQALYPVHPCSYDYRQHSLRLPPASPYDKFLKAAGC* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2195 972 Gene3D - 94 505 IPR011989 -
Tpr3g2195 972 PANTHER CYCLIN-LIKE PROTEIN 1 972 - -
Tpr3g2195 972 PANTHER PUTATIVE, EXPRESSED-RELATED 1 972 - -
Tpr3g2195 972 SUPERFAMILY ARM repeat 71 505 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2195 Tpr-Chr3 20540346 20551242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2195 K21842 - gmx:100817330 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4572 7 54196516 54206327 Tpr3g2195 3 20540346 20551242 PCT