Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4549 ATGAGTGGAGTTAAGTTTTTGCAAGCTATAACCGTCGCAATATTCATATTATCACTCACAACCACCACCGTCCGGTCATGTCCACCGTCAGACAGGGCGGCGCTACTAGCATTCAAAGCAGCTCTCCATGAACCATATATCGGCGTCTTCACCTCATGGACAGGAGCCGACTGCTGCCACAATTGGTACGGAGTTAGCTGCGACAAAGAATCTCGCCGCGTCGCCGATATAAACCTCCGCGGCGAATCAGAAGATCCAATCTATCAAAAGAAACACCGTACCGGTTACATGACCGGTTACATCTCACCGTCAATCTGTAAACTAACTCGTCTCTCAAGCTTTACCGTCGCCGATTGGAAAGGTATCTCCGGCGAAATTCCTCGCTGTATTTCCACCCTCCCTTTTCTTCGCATCATCGACTTAATCGGAAACAGAATCTCCGGTAATATCCCCACCGACATCGGTAGGCTTCAACGTCTAACCGTTTTCAACATCGCCGACAATGTTATCTCCGGTAACATTCCACCGTCGCTAACAAATCTGAGAAGTTTAATGCATCTTGATATCCGTAATAATCGGATCTCAGGTCCTTTACCTAATGACTTCGGTAGACTTCCAATGCTGAGTCGGGCTTTACTGAGCGGTAATAAAATTACGGGTCATATTCCCGACTCAGTATCACGTATTTACCGTCTCGCAGATCTGGATCTATCAAGAAATCAAGTTTCTGGACCCATACCCGAATCATTGGGTAAAATGGCGGTTTTATCCACACTTAATTTGGATATGAATAATATTTCAGGAACTATACCAATAAGTCTTTTTAATTCAGGAATAAGTGATTTAAATTTAAGCCGAAATGCTTTGGAAGGTAATATACCCGATGTGTTTGGTGTGAGATCATATTTTACGGTTTTGGATTTGTCTTATAATCATCTTAAGGGTCCAATTCCAAAATCAATGGCTTCTGCTTCTTATATTGGACATTTGGATTTAAGTTATAATCACTTATGTGGTAAGATACCTGTTGGAGATCCTTTTGATCATTTGGAGGCTTCATCTTTTGTCTACAATGATTGTCTTTGTGGGAAACCACTTAAAGCTTGTGCTTACTAA 1116 0.4238 MSGVKFLQAITVAIFILSLTTTTVRSCPPSDRAALLAFKAALHEPYIGVFTSWTGADCCHNWYGVSCDKESRRVADINLRGESEDPIYQKKHRTGYMTGYISPSICKLTRLSSFTVADWKGISGEIPRCISTLPFLRIIDLIGNRISGNIPTDIGRLQRLTVFNIADNVISGNIPPSLTNLRSLMHLDIRNNRISGPLPNDFGRLPMLSRALLSGNKITGHIPDSVSRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNNISGTIPISLFNSGISDLNLSRNALEGNIPDVFGVRSYFTVLDLSYNHLKGPIPKSMASASYIGHLDLSYNHLCGKIPVGDPFDHLEASSFVYNDCLCGKPLKACAY* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4549 371 Pfam Leucine Rich Repeat 183 205 IPR001611 GO:0005515
Tpr7g4549 371 Gene3D Ribonuclease Inhibitor 94 371 IPR032675 -
Tpr7g4549 371 Gene3D Ribonuclease Inhibitor 24 93 IPR032675 -
Tpr7g4549 371 SUPERFAMILY L domain-like 26 367 - -
Tpr7g4549 371 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 369 - -
Tpr7g4549 371 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tpr7g4549 371 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4549 Tpr-Chr7 53993583 53995411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4549 92 370 Receptor kinase-like Gene Family AT5G46330 36.842 1.99e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4549 - - gmx:100804739 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4549 7 53993583 53995411 Tpr3g2156 3 19903705 19905323 PCT