Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2156 ATGTGTGGTGCTAGAGTACTTTTGACAATGTCACTACTAGTAGTTACCTTAGAATTTCTTAGTGTCTCACCTGTTGAGTCATGCCCTCCTTCTGAATGGGCAGCACTAATGTCTTTCAAAGCAGCTCTCAATGAACCTTACTTTGGAATCTTCCATTCATGGAGAGGCACCAATTGTTGTTACAATTGGTATGGTATTAGTTGCGACCCAACCACACGTCGAGTCGCAGAGATCACCCTCAACGGTCTCACCGTGGGGGACAACCACCGGCGCTATAGGCGTACCAAAACCGTGGAAAGTGGATACATGACTGGACACATTTCCCCATCAATTTGCAACCTCACACAACTCTCTAGCATTACCATCTCCGAGTGGAAGGGCATTTCGGGAAATATCCCTGAATGCATCACAACCCTCAGTTTTCTTCAAATCATAGATCTCTCTGGAAACTATATTTCTGGAAAGATTCCATATGAAATAGGGCGCCTTACCCAACTTACAATGCTCAACCTTGCAGAGAATCATATCTCTGGAAAGATTCCAAACACTCTTATAAACCTCTTTAACTTAATGCAACTTGATCTTCGTAACAATGCTTTGGAGGGCCCCATTCCCGGGAACATCGGCAAACTCAAAAAGTTGAACCGGGCATTACTAAGTCACAACCGGATAAACGGTCGAATTCCACGATCTTTTTCAAATATTTACGGGCTGGCAGACTTGGATCTATCGTTGAATAGGTTATCCGGTCCAATTCCATTTTCGTTGGGACAAATGTCAGTTCTGGACTCACTAAACCTGAAGTATAACAACTTGACGGGGAGGATCCCGAAGACTTTGTTGGCATCGAGACTGAGCCATTTGGATTTGAGTAGAAATGCTTTGAGGGGACCTATACCGGACGTGTTTAGTGAAACCTCGTATTTCATAAACCTTGATTTGTCGTTTAATCATTTGAATGGTTTGATTCCCAAGTCTATGGCATTAGCCTTGTACATTGGCCACACGGACTTTAGTCACAACCATCTCTTTGGGAGGATTCCGGCTGTTCCTTCCTTTAGCCACCTTCAACAAGCATCGTTTGAACACAACCAACGCCTTTGCGGCAAACTACTTAAACCATGCACTGATGATCTCATACACATACATGAATAA 1155 0.4364 MCGARVLLTMSLLVVTLEFLSVSPVESCPPSEWAALMSFKAALNEPYFGIFHSWRGTNCCYNWYGISCDPTTRRVAEITLNGLTVGDNHRRYRRTKTVESGYMTGHISPSICNLTQLSSITISEWKGISGNIPECITTLSFLQIIDLSGNYISGKIPYEIGRLTQLTMLNLAENHISGKIPNTLINLFNLMQLDLRNNALEGPIPGNIGKLKKLNRALLSHNRINGRIPRSFSNIYGLADLDLSLNRLSGPIPFSLGQMSVLDSLNLKYNNLTGRIPKTLLASRLSHLDLSRNALRGPIPDVFSETSYFINLDLSFNHLNGLIPKSMALALYIGHTDFSHNHLFGRIPAVPSFSHLQQASFEHNQRLCGKLLKPCTDDLIHIHE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2156 384 SUPERFAMILY L domain-like 27 369 - -
Tpr3g2156 384 Pfam Leucine Rich Repeat 210 234 IPR001611 GO:0005515
Tpr3g2156 384 Gene3D Ribonuclease Inhibitor 27 96 IPR032675 -
Tpr3g2156 384 Gene3D Ribonuclease Inhibitor 97 378 IPR032675 -
Tpr3g2156 384 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Tpr3g2156 384 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 384 - -
Tpr3g2156 384 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 384 IPR045273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2156 Tpr-Chr3 19903705 19905323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2156 103 378 Receptor kinase-like Gene Family AT3G11080 28.125 1.63e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2156 - - lja:Lj3g3v3246320.1 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2156 3 19903705 19905323 Tpr3g2156 3 19903705 19905323 ECH
Tpr7g4549 7 53993583 53995411 Tpr3g2156 3 19903705 19905323 PCT