Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr7g4386 | ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGCTGCTTCAATCTTCCTTCATACACTTGCATTCGTGAAGGTCCTGATCACGCTCCAAGGTTTAAAGCTACCGTTAACTTTAACGGCGAGATCTTCGAGAGTCCTCACTACTGTTCAACTCTCCGTCAAGCTGAACACTCCGCTGCTGAAGTTGCTCTCAATTCGCTTTCACATCGTGGTCCTTCTCACTCTCTCGCTGCTAAGATTCTCGACGAGACTGGAGTCTACAAGAACCTCTTGCAAGAAATTTCACAACGAGTCGGGGCTCCATTGCCTCAGTACACAACATTCAGATCAGGCCTAGGACATTTACCTGTTTTTACTGGGATAGTAGAATTGGCAGGTATCACTTTTACTGGTGAACCTGCCAAGAATAAGAAACAAGCCGAGAAGAATGCAGCTATGGCAGCTTGGTCTTCTTTAAAGCAATTGGCAAAAGAGACTGCTAGCTCTTCAACTGAACCTGAGAACAATGACGAATTAGAACAGATCACCATAGCACGGGCTTTGCTGAACTACCGTCTAAAAGAAAAGATGGCAATGTCCAATCCAAATGCTCCGATTCCATTTCAGAAAAAGTTTCAGATTCAAAATATCAGGCCGACTAGTTCTCAACCTTCTGCCACCACATCAAAGATCCTTCCCCTAATTTGCAAAAAGACAAGACCTCAATACAAACCTTCACCAGCAACAGCAAATGAAAATCCTCGAAGCAGGCATCCGCCAGCAGCAGCAACCAATGACAAGTCCATGGTGCATCCGCCACAATCTTCTGCACTAGAAAGCCGGGTGACCCGTCCTCTGAGGTTCCCTGCAGCAGGAGCAGCACCTTATGTTCCCATTCGACAAATGAGATCACCTTGCCATGGGATTGCACCTCCAGTGGCTATGAGGACCATAGTACCTGTGTTCTCCGCACCACCTCTGCCACCACCTGCGTCAGTCCATCAGGTTATACGGGCTCCTCCTGTACGAGTAGCTCCTCCGGTCAGTATTCGGCAAGCTGTTCCTGTATATGCCGCCCCGCCACCAAGAAAAGATGAACCTTCCCCTGTCCAAAAAGATCTACCTGCCAGTAATGCCCCTGTCGAGCAAGATAAGCTTCCAGCTAAAATTCTAGAGATGGACAAGACTGAGAACAACCCACATCAATCCGAGACTTTGCTGAGTTTGGATCAGCTGAAAATTTGA | 1227 | 0.476 | MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEISQRVGAPLPQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMAMSNPNAPIPFQKKFQIQNIRPTSSQPSATTSKILPLICKKTRPQYKPSPATANENPRSRHPPAAATNDKSMVHPPQSSALESRVTRPLRFPAAGAAPYVPIRQMRSPCHGIAPPVAMRTIVPVFSAPPLPPPASVHQVIRAPPVRVAPPVSIRQAVPVYAAPPPRKDEPSPVQKDLPASNAPVEQDKLPAKILEMDKTENNPHQSETLLSLDQLKI* | 409 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr7g4386 | 408 | Gene3D | - | 84 | 155 | - | - | |
| Tpr7g4386 | 408 | SMART | DRBM_3 | 88 | 154 | IPR014720 | - | |
| Tpr7g4386 | 408 | SMART | DRBM_3 | 2 | 69 | IPR014720 | - | |
| Tpr7g4386 | 408 | Pfam | Double-stranded RNA binding motif | 2 | 68 | IPR014720 | - | |
| Tpr7g4386 | 408 | Pfam | Double-stranded RNA binding motif | 88 | 153 | IPR014720 | - | |
| Tpr7g4386 | 408 | MobiDBLite | consensus disorder prediction | 394 | 408 | - | - | |
| Tpr7g4386 | 408 | SUPERFAMILY | dsRNA-binding domain-like | 2 | 68 | - | - | |
| Tpr7g4386 | 408 | Gene3D | - | 2 | 83 | - | - | |
| Tpr7g4386 | 408 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 87 | 155 | IPR014720 | - | |
| Tpr7g4386 | 408 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1 | 70 | IPR014720 | - | |
| Tpr7g4386 | 408 | MobiDBLite | consensus disorder prediction | 231 | 274 | - | - | |
| Tpr7g4386 | 408 | CDD | DSRM_AtDRB-like_rpt2 | 86 | 154 | IPR044451 | GO:0003725 | |
| Tpr7g4386 | 408 | MobiDBLite | consensus disorder prediction | 351 | 408 | - | - | |
| Tpr7g4386 | 408 | CDD | DSRM_AtDRB-like_rpt1 | 1 | 69 | IPR044450 | GO:0003725 | |
| Tpr7g4386 | 408 | PANTHER | - | 1 | 379 | - | - | |
| Tpr7g4386 | 408 | PANTHER | RNA BINDING PROTEIN, PUTATIVE-RELATED | 1 | 379 | - | - | |
| Tpr7g4386 | 408 | SUPERFAMILY | dsRNA-binding domain-like | 88 | 159 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr7g4386 | Tpr-Chr7 | 52621487 | 52625797 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr7g4386 | - | - | cam:101510954 | 688.723 |
Event-related genes