Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4378 ATGCGAATTCTCATTCTTCTCTCTCTCACATCACTTCTCATCTTCTCTTCTTTCTCTCCAATTCTCTCCAAAGAACAACAACTCGACGAAGAAGAAGATCTCAGCTTCCTCGACGAACCAGACTCCGACGAAACAATCTCCCATCACGATCACGACCACGATTCCGATTTCGAAGAAGATTTCTCCGGCTACGATAATTCAGAGTCTTATCAAACTCCCGAAATCGACGAAAAAGACGTCGTCGTTTTGAAGGATAATAATTTCACCGATGTAGTCAACAAAAACCGTTTCGTTTTGGTTGAATTTTATGCACCTTGGTGTGGTCATTGTCAAGCTTTGGCTCCTGAATATGCTGCCGCTGCTACTGAATTGAAAAGTGAAAATGTTGTTTTAGCGAAAGTTGATGCTACTGAAGAGAGTGAAGTTTCCCAGAAATTCGATGTTCAGGGTTTTCCTACTATCCTTTTCTTCATTGATGGTGTTCACAAGACTTATTCTGGACAAAGAACAAAAGAAGCTATAGTTACATGGATTAAGAAGAAGACAGGACCGGGTATTCATAACATTACTTCATTGGAAGATGGTCAACGCATATTGACTTCTGAAACTAAAGTTGTTTTGGGTTTTCTCAATTCTTTAGTTGGTCCTGAGAGTGAGGAGCTTGCTGCGGCTTCACGACTTGAGGATGATGTTAATTTTTATCAGACTGTGGATCCTGAAGTGGCAAAGCTTTTCAATATTGATGTTAATGCCAAACGCCCAGCTTTGATCCTTGTCAAGAAAGAGGACGAAAAACTGAACCATTTTGATGGAAAATTCGATAAGTCTGCAATTGTAGACTTTGTCTCCTCCAACAAGCTCCCATTGGTAACAGTCTTTACAAGAGAAAGCGCTCCAACAATCTTTGAAAATCCAATCAAGAAACAGGTGTTGCTGTTTGCGATCAATGATACTGAGAAACTCCTCCCAGTATTTCAGGAAGCATCAAAGTCTTTCAAGGGAAAGTTGATCTTTGTGCTCGTGGAAACTGATAACGAAGATGTTGGAAAGTCTGTTTCAGAATACTTTGGTATTAGTGGGAGTGATCCAAAAGTACTTGCATACACCGGAAATGATGATGGGAAAAAATTCATTTTTGATGGAGAGGTGACTGTTGACAAAATTAAGGCATTTGGCGAAGATTTCCTTGAAGACAAACTAAAACCTTTTTTCAAGTCAGACCCAGTTCCTGAAACTAATGATGGTGACGTGAAAATAGTTGTTGGGAATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGATATATGCTCCCTGGTGTGGCCATTGCCAACATTTGGAACCAATATACAACAAGCTTGCTAAACATCTTCGCAGTATTGACTCTCTTGTAATAGCCAAGATGGACGGAACACAAAATGAGCATCCCAGGGCAAAGTCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAAAGCTTTGATCCCATTACTGTTGAGACTGATCGTACAGTGGTCGCCTTTTATAAGTTCCTCAAGCAACATGCTTCAATCCCATTCAAGCTCCAGAAACCAGCCTCAACTCCTAAACCGGAGGGCTCTGATGTCAAGGAGACCCAAAGTAGCAGCAATAGTGATGTGAAGGATGAACTTTGA 1677 0.4079 MRILILLSLTSLLIFSSFSPILSKEQQLDEEEDLSFLDEPDSDETISHHDHDHDSDFEEDFSGYDNSESYQTPEIDEKDVVVLKDNNFTDVVNKNRFVLVEFYAPWCGHCQALAPEYAAAATELKSENVVLAKVDATEESEVSQKFDVQGFPTILFFIDGVHKTYSGQRTKEAIVTWIKKKTGPGIHNITSLEDGQRILTSETKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVDPEVAKLFNIDVNAKRPALILVKKEDEKLNHFDGKFDKSAIVDFVSSNKLPLVTVFTRESAPTIFENPIKKQVLLFAINDTEKLLPVFQEASKSFKGKLIFVLVETDNEDVGKSVSEYFGISGSDPKVLAYTGNDDGKKFIFDGEVTVDKIKAFGEDFLEDKLKPFFKSDPVPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRSIDSLVIAKMDGTQNEHPRAKSDGFPTLLFFPAGNKSFDPITVETDRTVVAFYKFLKQHASIPFKLQKPASTPKPEGSDVKETQSSSNSDVKDEL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4378 558 ProSiteProfiles Thioredoxin domain profile. 61 183 IPR013766 -
Tpr7g4378 558 CDD PDI_a_PDI_a'_C 417 519 - -
Tpr7g4378 558 CDD PDI_b'_family 297 396 - -
Tpr7g4378 558 Pfam Thioredoxin-like domain 221 391 - -
Tpr7g4378 558 Gene3D Glutaredoxin 284 411 - -
Tpr7g4378 558 SUPERFAMILY Thioredoxin-like 413 524 IPR036249 -
Tpr7g4378 558 Pfam Thioredoxin 80 180 IPR013766 -
Tpr7g4378 558 Pfam Thioredoxin 417 504 IPR013766 -
Tpr7g4378 558 PANTHER PROTEIN DISULFIDE ISOMERASE 47 544 - -
Tpr7g4378 558 SUPERFAMILY Thioredoxin-like 73 183 IPR036249 -
Tpr7g4378 558 Gene3D Glutaredoxin 412 525 - -
Tpr7g4378 558 ProSitePatterns Thioredoxin family active site. 437 455 IPR017937 -
Tpr7g4378 558 PRINTS Thioredoxin family signature 147 158 - -
Tpr7g4378 558 PRINTS Thioredoxin family signature 98 106 - -
Tpr7g4378 558 PRINTS Thioredoxin family signature 106 115 - -
Tpr7g4378 558 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Tpr7g4378 558 PANTHER PROTEIN DISULFIDE-ISOMERASE 47 544 - -
Tpr7g4378 558 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
Tpr7g4378 558 CDD PDI_a_family 81 178 - -
Tpr7g4378 558 MobiDBLite consensus disorder prediction 41 60 - -
Tpr7g4378 558 Gene3D Glutaredoxin 183 283 - -
Tpr7g4378 558 MobiDBLite consensus disorder prediction 38 63 - -
Tpr7g4378 558 TIGRFAM pdi_dom: protein disulfide-isomerase domain 83 181 IPR005788 GO:0003756
Tpr7g4378 558 Gene3D Glutaredoxin 67 182 - -
Tpr7g4378 558 MobiDBLite consensus disorder prediction 529 558 - -
Tpr7g4378 558 ProSiteProfiles Thioredoxin domain profile. 395 524 IPR013766 -
Tpr7g4378 558 TIGRFAM ER_PDI_fam: protein disulfide isomerase 78 558 IPR005792 GO:0003756
Tpr7g4378 558 CDD PDI_b_family 186 285 - -
Tpr7g4378 558 SUPERFAMILY Thioredoxin-like 285 414 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4378 Tpr-Chr7 52557320 52561169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4378 K09580 - gmx:100804924 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4378 7 52557320 52561169 Tpr4g1701 4 17531385 17536641 PCT