Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1701 ATGCTAAACCATAAACGACACGTCGTTTTCCTCTCCCTCACCACTCTTCTTCTCCTCTCTTCATTCTCTCTCACTCTCTGCGAAAAAGCCTCTAAAAACGACGAAGATGAAGATCTCAGCTTCCTCGAAGAACCAGAAGACGACGCATCAACAACACACCACGACCACGGCAATTTCCCAGATCCCGATCAATTCGAAGACGACGACGAAGACTTCGGCGACGGTGATTTCTCCGGCTTTGATCCTAACTCGGAAGAGTTCAATGAACCAGAAGTGGATGACAAAGACGTCGTCGTTTTGAAGGAGCGAAATTTCACAACAGTAATTGAAAATAATAAATTCGTGATGGTTGAATTCTATGCTCCATGGTGTGGTCATTGTCAAGCTCTGGCGCCGGAGTATGCTGCAGCAGCCACTGAGTTGAAGAACGAGGGTGTTGTTTTGGCTAAGGTGGATGCTTCTCAGGAAAATGAATTGGCTCATGAGTATGATGTTCAAGGTTTTCCTACTGTTTACTTTTTCATCGATGGAGTTCATAAACCTTACAATGGCCAAAGAACCAAAGATGCTATAGTGACATGGATTAAGAAGAAGATAGGACCTGGTGTATACAACATAACTACATTGGATGATGCTGAACGCATATTGACCTCGGAAACTAAAGTTGTTTTGGGCTTCCTTGATTCTTTAGTTGGTGCTGAGAGTGATGAGCTAGCTGCAGCATCAAAACTTGAGGACGGCGTAAACTTTTACCAAACTGTGATTCCTAATGTGGCTAAGCTTTTCCATATTGACCCAAATGTCAAGCGCCCTGCTCTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGCCAATTTGAAAAAGCTGCAATAGCCAACTTTGTATCCTCCAACAAGCTTCCATTGGTCTCAACTTTTACAAGGGAAAGTGCCCCGGTGATTTTTGAAAGTCCAATTAAGAAACAGTTGTTGCTGTTTGTGACTAAAAATGATACAGCAAAGTTCATTTCAGTATTTCAAGAAGCAGCAAAGTTTTTCAAGGGGAAGCTGGTCTTTGTTCACGTGGAAATGGATAATGAAGATGATGGAAAGCCTGTTGCAGATTATTTTGGTATCTCTGGGAATACTCCCAAAGTACTTGCATTCACCGCAAATGATGCCAGAAAATTTTTGCTTGATGGAGAGGTGACCGTTGACAATATTAAGGCATTTGGAGAAGATTTCCTTGTAGACAAGCTAAAACCTTTCCTCAAGTCAGATCCAATTCCTGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGCAATAACTTCGACGAAATTGTATTGGATGAATCGAAGGATGTTCTACTTGAGGTTTATGCTCCCTGGTGTGGCCATTGCCAAGCCTTGGAACCAGCATACAACAAGCTAGCAAAACATCTTCATAGCATTGATTCTATTGTAATAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGATGGGTTCCCTACTCTCCTCTTTTACCCAGCAGGAAAAAAGAGTTCTGACCCTATTACTGTTGACGCGGATCGCACAGTGGTGGCCTTTTATAAGTTCCTCAAGAAACACGCATCAATCCCATTCCAACTCCAGAAACCAACCTCAACTTCTAAAACCAAGGATAGTGGGAGTTCTGATGTCAAGGAGAGTCAAAGTAGCAGCACAGATGTGAAGGATGAATTATGA 1734 0.4245 MLNHKRHVVFLSLTTLLLLSSFSLTLCEKASKNDEDEDLSFLEEPEDDASTTHHDHGNFPDPDQFEDDDEDFGDGDFSGFDPNSEEFNEPEVDDKDVVVLKERNFTTVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKNEGVVLAKVDASQENELAHEYDVQGFPTVYFFIDGVHKPYNGQRTKDAIVTWIKKKIGPGVYNITTLDDAERILTSETKVVLGFLDSLVGAESDELAAASKLEDGVNFYQTVIPNVAKLFHIDPNVKRPALVLLKKEEEKLNHFDGQFEKAAIANFVSSNKLPLVSTFTRESAPVIFESPIKKQLLLFVTKNDTAKFISVFQEAAKFFKGKLVFVHVEMDNEDDGKPVADYFGISGNTPKVLAFTANDARKFLLDGEVTVDNIKAFGEDFLVDKLKPFLKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEVYAPWCGHCQALEPAYNKLAKHLHSIDSIVIAKMDGTTNEHPRAKSDGFPTLLFYPAGKKSSDPITVDADRTVVAFYKFLKKHASIPFQLQKPTSTSKTKDSGSSDVKESQSSSTDVKDEL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1701 577 SUPERFAMILY Thioredoxin-like 90 200 IPR036249 -
Tpr4g1701 577 Gene3D Glutaredoxin 200 303 - -
Tpr4g1701 577 PRINTS Thioredoxin family signature 115 123 - -
Tpr4g1701 577 PRINTS Thioredoxin family signature 123 132 - -
Tpr4g1701 577 PRINTS Thioredoxin family signature 164 175 - -
Tpr4g1701 577 Gene3D Glutaredoxin 84 199 - -
Tpr4g1701 577 MobiDBLite consensus disorder prediction 35 93 - -
Tpr4g1701 577 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 569 - -
Tpr4g1701 577 ProSitePatterns Thioredoxin family active site. 116 134 IPR017937 -
Tpr4g1701 577 TIGRFAM pdi_dom: protein disulfide-isomerase domain 101 198 IPR005788 GO:0003756
Tpr4g1701 577 ProSiteProfiles Thioredoxin domain profile. 78 200 IPR013766 -
Tpr4g1701 577 CDD PDI_b_family 203 302 - -
Tpr4g1701 577 CDD PDI_b'_family 314 413 - -
Tpr4g1701 577 Gene3D Glutaredoxin 428 542 - -
Tpr4g1701 577 Gene3D Glutaredoxin 304 427 - -
Tpr4g1701 577 SUPERFAMILY Thioredoxin-like 302 431 IPR036249 -
Tpr4g1701 577 MobiDBLite consensus disorder prediction 46 61 - -
Tpr4g1701 577 Pfam Thioredoxin-like domain 238 408 - -
Tpr4g1701 577 PANTHER PROTEIN DISULFIDE ISOMERASE 2 569 - -
Tpr4g1701 577 ProSiteProfiles Thioredoxin domain profile. 412 541 IPR013766 -
Tpr4g1701 577 SUPERFAMILY Thioredoxin-like 203 314 IPR036249 -
Tpr4g1701 577 CDD PDI_a_PDI_a'_C 434 536 - -
Tpr4g1701 577 MobiDBLite consensus disorder prediction 547 567 - -
Tpr4g1701 577 TIGRFAM ER_PDI_fam: protein disulfide isomerase 95 577 IPR005792 GO:0003756
Tpr4g1701 577 MobiDBLite consensus disorder prediction 547 577 - -
Tpr4g1701 577 Pfam Thioredoxin 434 519 IPR013766 -
Tpr4g1701 577 Pfam Thioredoxin 97 197 IPR013766 -
Tpr4g1701 577 ProSitePatterns Thioredoxin family active site. 454 472 IPR017937 -
Tpr4g1701 577 SUPERFAMILY Thioredoxin-like 430 541 IPR036249 -
Tpr4g1701 577 CDD PDI_a_family 98 195 - -
Tpr4g1701 577 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1701 Tpr-Chr4 17531385 17536641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1701 K09580 - gmx:100785630 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1701 4 17531385 17536641 Tpr4g1701 4 17531385 17536641 ECH
Tpr7g4378 7 52557320 52561169 Tpr4g1701 4 17531385 17536641 PCT