Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4353 ATGAGAAACAAAGCCACCCTTTTGTTAATGCTTATTGTTTGTCATGGCTTGTCCATGACAATGGGAATGTGTGAGGCAGAAGATAAAGAAAATGATCATCCATTGCCAAGAAAATTGTTCTTGATGAAAAATTACAAGCGTATGGTGAATACTGATGCAGGGGAAATGAGAGTGTTGGAGAGTTATGGTAAAATTCATGAAAGAAGATTGCACATTGGTATCATTGATATGGAACCAAACTCACTTTTTGTTCCTCAATATCTTGATTCCACTCTCATCATATTCGTCCGTTCAGGTGAAGCAAAGGTGGGATTCATATATGAGGGTGACTTGGCAGAGAAGGAATTGAAGAAGGGGGATGTGTATCTAATACCAGCAGGTTCTGCCTTCTATTTGTTGAATACTGGGGAGGATGAAAAGCTTGAAATTATTTGCAGCATTGATCCCTCAGAGAGTTTAGGAATAGGTGCTTACCAGTCTTTCTATATTGGAGGGGGAGCCAATCCAGTGTCAGTACTTTCCGGATTCCAGCCTCAAATCCTTGAAAGCGCTTTTAACGTATCAGCAGCAGATTTGACGAAATTCTTCACGAGGCAACATGAGGGTCCAATTGTGTACGTAGGTGAGTCACATGTCAAAGCCTCAAGTTTATGGACCAAATTCCTTCAACTAAAAGAGGATGATAAACTGCATCACATGAAGAAAATGATGCTAGATCACGACGAAGACGAAGATGAAGATGATAATGATGAAGTAGAGCAAAAAACAAGTTGGTCTTGGAGGAAGCTATTGGAATCTGTATTTGGGTTTGAGATAAAAAATAATAAAAAGGTCGAGGTTGCTCGTAAATCCCCTCACTCTTGCAACCTGTATGATAGAAAACCAGATTTCAAAAACAGTCATGGTTGGACCGTTTCTATTGACGGTTCCGATTATGCACCACTCAAAAGTTCCGGCATTGCCATTTATCACGTCAATCTCAAACCGGGAACGATGATGACACCGCATGTAAATCCAAGCGCAACGGAGTATGGCATAGTGGTCAGAGGTGTAGGTAGACTTCAAGTAGCATTTCCAAATGGAACCCTTGCAATGGACACACATATAAAAGAAGGAGATGTTTTCTTCATACCAAGATACTTTGCATTCAGTCAAATAGCAGCAAATGTAAGTGATGAACCACTAGACTTTTTTGGGTTCACTACTTCTGCAAAGAAGAATAAGCCACAATTTTTGGTTGGTGCAAATTCACTTATGAAAAGCATGATGGGACCTGAACTTGCTGCTGCTTTTGGAGTGAGTGAGGATATAATGAAAAGCATCCTTAATGCACAACATGAGTCTGTTATACTACCTTCATCTGTAAGCCACTAG 1374 0.4017 MRNKATLLLMLIVCHGLSMTMGMCEAEDKENDHPLPRKLFLMKNYKRMVNTDAGEMRVLESYGKIHERRLHIGIIDMEPNSLFVPQYLDSTLIIFVRSGEAKVGFIYEGDLAEKELKKGDVYLIPAGSAFYLLNTGEDEKLEIICSIDPSESLGIGAYQSFYIGGGANPVSVLSGFQPQILESAFNVSAADLTKFFTRQHEGPIVYVGESHVKASSLWTKFLQLKEDDKLHHMKKMMLDHDEDEDEDDNDEVEQKTSWSWRKLLESVFGFEIKNNKKVEVARKSPHSCNLYDRKPDFKNSHGWTVSIDGSDYAPLKSSGIAIYHVNLKPGTMMTPHVNPSATEYGIVVRGVGRLQVAFPNGTLAMDTHIKEGDVFFIPRYFAFSQIAANVSDEPLDFFGFTTSAKKNKPQFLVGANSLMKSMMGPELAAAFGVSEDIMKSILNAQHESVILPSSVSH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4353 457 SUPERFAMILY RmlC-like cupins 46 448 IPR011051 -
Tpr7g4353 457 Gene3D Jelly Rolls 280 454 IPR014710 -
Tpr7g4353 457 PANTHER OS03G0336100 PROTEIN-RELATED 3 455 - -
Tpr7g4353 457 CDD cupin_7S_vicilin-like_N 48 216 - -
Tpr7g4353 457 Gene3D Jelly Rolls 27 221 IPR014710 -
Tpr7g4353 457 PANTHER OS03G0336100 PROTEIN 3 455 - -
Tpr7g4353 457 SMART Cupin_1_3 288 439 IPR006045 -
Tpr7g4353 457 SMART Cupin_1_3 37 193 IPR006045 -
Tpr7g4353 457 CDD cupin_7S_vicilin-like_C 295 448 - -
Tpr7g4353 457 Pfam Cupin 47 146 IPR006045 -
Tpr7g4353 457 Pfam Cupin 289 436 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4353 Tpr-Chr7 52303021 52305617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4353 48 451 Miscellaneous Gene Families AT2G18540 29.356 2.05e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4353 - - gmx:100818796 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4353 7 52303021 52305617 Tpr4g1730 4 17849637 17852929 PCT