Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4336 ATGTCTTCAAGTGGTAAAGATTTAGTAGAAGGAGGATCATCAACCTCTCAAGGGATCACACTTAGTCGCTATGAATCTCAAAAGAGAAGAGATTGGAACACTTTTGGTCAATACTTAAACAACCTAAGACCACCAGTTCCACTTTCTCAGTGCAATTCCAACCATGTTTTGGAGTTTCTTAGGTATTTAGATCAATTTGGAAAAACCAAAGTTCATTTACAAGGTTGTATATTTTATGGACAGCCGGAACCGCCGGCACCATGTACATGTCCCCTAAGACAAGCTTGGGGAAGCCTTGATGCTCTAATTGGGAGGTTAAGGGCTGCTTATGAGGAAAACGGTGGAACTCCAGAGACTAATCCTTTTGCGAGTGGTGCTATTCGTGTTTATCTTAGAGAGGTTAGGGAGTGTCAAGCTAAGGCTAGGGGTATCCCTTACAAGAAGAAAAAGAAGGGTACAAATAATCAAAACAAGGGAAATGATGGATCAAGCTCATCCATGCACTTTTCTTGA 513 0.4133 MSSSGKDLVEGGSSTSQGITLSRYESQKRRDWNTFGQYLNNLRPPVPLSQCNSNHVLEFLRYLDQFGKTKVHLQGCIFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKGTNNQNKGNDGSSSSMHFS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4336 170 PANTHER DUF640 FAMILY PROTEIN 2 170 - -
Tpr7g4336 170 MobiDBLite consensus disorder prediction 144 170 - -
Tpr7g4336 170 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g4336 170 MobiDBLite consensus disorder prediction 156 170 - -
Tpr7g4336 170 Pfam ALOG domain 16 136 IPR006936 -
Tpr7g4336 170 ProSiteProfiles ALOG domain profile. 23 150 IPR006936 -
Tpr7g4336 170 PANTHER PROTEIN G1-LIKE2 2 170 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4336 Tpr-Chr7 52098496 52102626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4336 - - gmx:100306225 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4336 7 52098496 52102626 Tpr7g3440 7 42641614 42644822 ECH
Tpr7g4336 7 52098496 52102626 Tpr7g4336 7 52098496 52102626 ECH
Tpr7g4336 7 52098496 52102626 Tpr7g2953 7 36814556 36822297 ECH