Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3440 ATGTCCAACAAAGGAAAAGACATAGTAGAAGGATCATCAAGATCTTCTACTACTTCAATTTCAACCGGTGGTGGCGATCATAAGCATCATCAGCAACAGGTTCCACTCAGTCGATACGAGTCACAAAAGAGAAGAGACTGGAACACTTTCGGACAATATTTAAGGAATCAAAGGCCGCCGGTAGCACTTTCTCAATGTAATTCAAACCATGTTCTTGAATTCCTAAGATACTTAGATCAATTTGGCAAGACAAAAGTGCACTTACAAGGTTGTTTGTTTTTCGGACAAACCGAACCGCCCGGTCCATGTACTTGTCCTCTAAAACAAGCTTGGGGAAGTCTTGATGCACTTATTGGAAGATTAAGAGCTGCTTATGAAGAAAATGGTGGATTACCTGAGACTAATCCTTTTGCTAGTGGTTCCATAAGAATTTATCTTCGTGAGGTGAGAGATTCTCAATCTAAGGCAAGAGGAATTCCTTACAAGAAGAAAAAGAAGAAAAGGATTGCAATTAAACATAACGGGGATACCTCAACTTTGCCTATGCAGTGA 552 0.4004 MSNKGKDIVEGSSRSSTTSISTGGGDHKHHQQQVPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQSKARGIPYKKKKKKRIAIKHNGDTSTLPMQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3440 183 PANTHER PROTEIN G1-LIKE2 2 183 IPR040222 -
Tpr7g3440 183 MobiDBLite consensus disorder prediction 1 41 - -
Tpr7g3440 183 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
Tpr7g3440 183 MobiDBLite consensus disorder prediction 164 183 - -
Tpr7g3440 183 MobiDBLite consensus disorder prediction 1 28 - -
Tpr7g3440 183 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 183 - -
Tpr7g3440 183 Pfam ALOG domain 31 151 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3440 Tpr-Chr7 42641614 42644822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3440 - - gmx:100527554 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4336 7 52098496 52102626 Tpr7g3440 7 42641614 42644822 ECH
Tpr7g3440 7 42641614 42644822 Tpr7g2953 7 36814556 36822297 ECH
Tpr7g3440 7 42641614 42644822 Tpr7g3440 7 42641614 42644822 ECH