Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4145 ATGTCTATGTCCACTCAAATCTTATCCGGCCACCTTGGGACTCTTGAACTTGCTGCGGCGTCTCTCGGTAACACCGGTATCCAAATCTTTGCTTATGGTCTCATGTTGGGTATGGGAAGTGCAGTTGAGACACTGTGTGGACAAGCATTTGGAGCAGAAAAATTTGACATGCTAGGATTATATTTACAAAGATCAACCATTCTTCTAACAATAACTGGTTTTTTTCTAACCGTTATTTACATCTTTAGCGAACAAATTCTTATCTTAATCGGACAATCACCAAGAATCGCTTCTGCAGCCGCACTTTTTGTCTACGGACTTATCCCACAAATATTTGCTTATGCAATCAATTTTCCAATCCAAAAATTCCTTCAAGCACAAAGCATTGTTCTACCAAGTGCTTATATTTCAGCAGCAACTTTAGTTGTTCATATAATATTGAGTTGGGTTGCTATCTATAAGATTGGTTTAGGCTTATTGGGTGCTTCATTGGTTTTGAGTTTTTCTTGGTGGATTATTGTTATTGCTCAATTTGTTTATATTTTGAAGAGTGAAAAGTGTAAGAGGACATGGAATGGGTTTACTTTGGAGGCATTTTCGGGGTTGCCGCAGTTTTTTAAACTGTCGGCTGCATCGGCGGTTATGTTGTGTCTTGAAACTTGGTATCTTCAGATTCTTGTTTTGCTTGCTGGGCTTCTTCCTAACCCTGAGGTGGCTCTTGATTCTCTTTCTATTTGTACCACAATTTCAGGATGGGTTTTCATGATCTCTGTTGGATTCAACGCAGCTGCAAGTGTAAGAGTGAGCAATGAACTAGGAGCAAGAAATCCAAAATCAGCATCATTTTCAGTTGTGGTGGTGACATTGATATCATTTGTAATATCAGTAATACTAGCAGTGGTTGTGTTTGCATTGAGAGATGTTATTAGCTATGTCTTCACAGAAGGTGAAGTTGTTGCTGCTGCTGTCTCAGATCTTTGTCCACTCCTCTGTCTTACTCTTGTCCTCAATGGCATTCAGCCTGTCTTATCTGGGGTTGCTGTTGGCTGTGGATGGCAAGCTTTTGTTGCTTATGTGAATGTAGGCTGCTATTATATAGTTGGTATACCATTGGGCGCAGTTCTCGGATTTTATTTCAATTTTGGCGCTAAGGGAATATGGCTAGGAATGATTGGTGGAACACTTATGCAGACAATTATTCTAATTTGGGTCACATTTAGAACGGATTGGAATAAAGAGGTGGAAGAAGCAGCCAACAGGTTGAACAAATTGGAGGACAGAAGGGAGCCCCTGCTAAACTAA 1302 0.4017 MSMSTQILSGHLGTLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAEKFDMLGLYLQRSTILLTITGFFLTVIYIFSEQILILIGQSPRIASAAALFVYGLIPQIFAYAINFPIQKFLQAQSIVLPSAYISAATLVVHIILSWVAIYKIGLGLLGASLVLSFSWWIIVIAQFVYILKSEKCKRTWNGFTLEAFSGLPQFFKLSAASAVMLCLETWYLQILVLLAGLLPNPEVALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARNPKSASFSVVVVTLISFVISVILAVVVFALRDVISYVFTEGEVVAAAVSDLCPLLCLTLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIVGIPLGAVLGFYFNFGAKGIWLGMIGGTLMQTIILIWVTFRTDWNKEVEEAANRLNKLEDRREPLLN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4145 433 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 421 - -
Tpr7g4145 433 TIGRFAM matE: MATE efflux family protein 1 387 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g4145 433 CDD MATE_eukaryotic 1 416 IPR045069 GO:0042910|GO:1990961
Tpr7g4145 433 Pfam MatE 212 373 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g4145 433 Pfam MatE 1 150 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g4145 433 PANTHER PROTEIN DETOXIFICATION 40 1 421 - -
Tpr7g4145 433 Coils Coil 407 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4145 Tpr-Chr7 50552626 50556069 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4145 K03327 - gmx:100801718 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4145 7 50552626 50556069 Tpr7g4145 7 50552626 50556069 ECH
Tpr7g4144 7 50545698 50551060 Tpr7g4145 7 50552626 50556069 PCT