Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4144 ATGGCTTCACTGAAGAATAGTAACGCTGCTGAGGAACCACTTTTGTTCACTCACAGCGATACGCCGTCGTTGAAACCCCACGAATCCAACGGCGAACTTGAGAGAATTCTATCAGACACCACCGTACCATTCTTCAACCGTATCAGCTCCGCTTCATGGATTGAGCTTAAACTATTGTTCTTCTTAGCTGCTCCTGCTGTTTTTGTTTATCTTATTAATTATGTTATGTCTATGTCCACTCAAATTTTCTCCGGTCATCTTGGAAATCTTGAACTCGCCGCGGCGTCTCTTGGAAACACCGGTATTCAAATCTTTGCTTATGGTCTCATGTTGGGTATGGGAAGTGCAGTTGAAACACTATGCGGACAAGCATTTGGAGCAGAAAAATTCGACATGCTAGGAATATATTTACAAAGATCAACAATTCTTCTAACAATTACCGGTTTTTTTCTGACCGTTATTTATGTCTTAAGTGAACCAATCCTAGTATTCATCGGACAATCACCAAGAATCGCTTCTGCAGCCGCGCTTTTTGTCTACGGACTTATCCCACAAATATTCGCTTATGCAGTCAATTTTCCAATCCAAAAATTCCTTCAAGCACAAAGCATTGTTCTACCAAGTGCTTATATTTCAGCAGCAACTTTAGTTGTTCATTTGATACTAAGTTGGGTTGTTGTGTTTAAGATTGGTTTAGGCTTATTGGGTGCTTCATTGGTTTTGAGTTTGTCTTGGTGGATTATTGTTGTTGCTCAGTTTGTTTATATTTTGAAGAGTGAAAAGTGTAAGAGGACATGGAAAGGATTTAGTTTGGAGGCCTTTTCCGGGTTGCCCGAGTTTTTTAAACTGTCCGCGGCATCGGCGGTTATGTTGTGTCTTGAATCTTGGTATTTTCAGATTCTTGTTTTGCTTGCTGGGCTTCTTCCTAACCCTGAGATCGCTCTTGATTCTCTTTCTATCTGTACCACAATTTCTGGATGGGTGTTCATGATCTCAGTTGGATTCAATGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAAAAAATCCAAAATCAGCATCATTTTCAGTTGTGGTGGTGACAATGATATCATTTGTAATATCAGTAATAGCAGCATTGGTTGTGCTTGCATTGAGAGATGTTATTAGCTATGTTTTCACAGAGGGTGAAGTTGTTGCTGCTGCTGTCTCAGATCTTTGTCCACTCCTCTCTCTTTCTCTTGTCCTCAATGGCATTCAACCTGTTTTATCTGGGGTTGCTGTTGGCTGTGGATGGCAAGCATTTGTTGCTTATGTGAATGTGGGTTGCTATTATATAGTTGGCATACCATTGGGTGCGGTTCTCGGATTTTATTTCAATTTTGGCGCTAAGGGAATATGGCTTGGAATGCTTGGTGGAACAACTATGCAGACAATTATTTTAATGTGGGTCACATTTAGAACAGATTGGAATAAAGAGGTTGAAGAAGCAGCCAAGAGGTTGAACAAATGGGAGGAGAGAAAGGAGCCCCTACTAAACTAA 1527 0.4086 MASLKNSNAAEEPLLFTHSDTPSLKPHESNGELERILSDTTVPFFNRISSASWIELKLLFFLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAEKFDMLGIYLQRSTILLTITGFFLTVIYVLSEPILVFIGQSPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATLVVHLILSWVVVFKIGLGLLGASLVLSLSWWIIVVAQFVYILKSEKCKRTWKGFSLEAFSGLPEFFKLSAASAVMLCLESWYFQILVLLAGLLPNPEIALDSLSICTTISGWVFMISVGFNAAASVRVSNELGAKNPKSASFSVVVVTMISFVISVIAALVVLALRDVISYVFTEGEVVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIVGIPLGAVLGFYFNFGAKGIWLGMLGGTTMQTIILMWVTFRTDWNKEVEEAAKRLNKWEERKEPLLN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4144 508 CDD MATE_eukaryotic 55 491 IPR045069 GO:0042910|GO:1990961
Tpr7g4144 508 Pfam MatE 287 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g4144 508 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g4144 508 Coils Coil 482 502 - -
Tpr7g4144 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 495 - -
Tpr7g4144 508 PANTHER PROTEIN DETOXIFICATION 13 495 - -
Tpr7g4144 508 TIGRFAM matE: MATE efflux family protein 65 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4144 Tpr-Chr7 50545698 50551060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4144 K03327 - gmx:100795338 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4144 7 50545698 50551060 Tpr7g4145 7 50552626 50556069 PCT