Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3877 ATGACAAAAAATTGTGACTACCACGAAGACGAACACCGCCAACTCATCCGGCGCATATTTGCCGGAATCCTTAGCTTCATAATCCTCATACTTCTTATAGTCTTCTTAGTATGGATCATCCTCCGACCAACCAAACCCCGGTTCATCCTCCAAGATGCAACCGTTTTCGCCTTCAACCTCTCCTCCACTGGCGAAACACCTTCTTCCACCATGCCTACACCAAACACCCTAACCCTCACAATTCAAGTCACTCTTTCATCCTTCAATCCAAACTCGAAAATTGGTATTTATTATCACAAACTTGACGCATACGCTTCCTATAGAGGACAACAAATCTCTTTAGCCACTGAACTACCACAAACTTATCAAGGACACCGCGATGTCGCAGTTTGGTCTCCTATACTCTATGGTGTGGCTGTTCCTGTTTCGCCTTACTTGTCGGAGATTCTCCGGCAAGATCAAACTTCAGGTGGAGTGATGGTCAACATTAAAGTCAACGGGAGAGTTAAGTGGAAAGTTGGGACTTGGGTTTCTGGAAGGTACCATATTGATGTCAACTGTCCGGCGTTTATCAGGGTGGCCGGCAATAAGGGTGACGACGGTTTCGGAGTTTCTGGTCCGGCGGTGAAGTTTCAGTTTTTGCAAAGTTGTGTTGTTGATGTTTAA 666 0.4565 MTKNCDYHEDEHRQLIRRIFAGILSFIILILLIVFLVWIILRPTKPRFILQDATVFAFNLSSTGETPSSTMPTPNTLTLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQISLATELPQTYQGHRDVAVWSPILYGVAVPVSPYLSEILRQDQTSGGVMVNIKVNGRVKWKVGTWVSGRYHIDVNCPAFIRVAGNKGDDGFGVSGPAVKFQFLQSCVVDV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3877 221 PANTHER OS05G0367900 PROTEIN 8 221 IPR044839 GO:0098542
Tpr7g3877 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
Tpr7g3877 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 8 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3877 Tpr-Chr7 47973778 47974968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3877 12 187 EF-hand Containing Proteins AT5G21130 24.309 3.05e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3877 - - pvu:PHAVU_005G120900g 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3877 7 47973778 47974968 Tpr7g3877 7 47973778 47974968 ECH
Tpr7g3877 7 47973778 47974968 Tpr4g1476 4 14525932 14526884 PCT