Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1476 ATGTCCATAAAAGAATGTGGCCACCACGACGATGAAGGCCGCGGCCTCCTCCGCCGCATAATCGCCGCCACTGCCTTCATTTTCCTAATCCTCCTAACCATTTTCCTAATATGGATCATCCTTAGACCAACAAAACCACATTTCATAATCCAAGATGCAACAATTTACACTTTCAACATCTCATCACCAAATTCTTCACCATTTCCTATTCCAAACACACTAACCCTCACAATGCAAATCACACTCTCAACTCACAACCCAAACAAAAGAATAGGAATTTACTATCAAAAACTTCACGTGTATGGTTCTTATAAAAACCAACAAATCTCACTACCAACTTCAATTCCTGATACTTACCAAGGTCATAAAGATTTTACCATTTGGTCGCCGTTTATTTACGGTGTTGGTGTTCCGGTTTCGCCTTTTACACTTAGCTCAATGCAACAGGATCAGAATAACGGAATGGTTTTGGTTAACGTCAAAATTAACGGAAGGGTTAAATGGAAGGTGGGAACTTGGATCTCTGGGAGGTACCATCTTTTTGTTAATTGTCCTGCTTATGTTCGGTTCGGTGGTGATCGGAATAACGGCGTCGGAGTTGTTGCTCCGGCAGTTAAGTTTCAGCTTTTGCAAAAATGTAAAGTTGATGTTTAG 654 0.4098 MSIKECGHHDDEGRGLLRRIIAATAFIFLILLTIFLIWIILRPTKPHFIIQDATIYTFNISSPNSSPFPIPNTLTLTMQITLSTHNPNKRIGIYYQKLHVYGSYKNQQISLPTSIPDTYQGHKDFTIWSPFIYGVGVPVSPFTLSSMQQDQNNGMVLVNVKINGRVKWKVGTWISGRYHLFVNCPAYVRFGGDRNNGVGVVAPAVKFQLLQKCKVDV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1476 217 PANTHER OS05G0367900 PROTEIN 7 217 IPR044839 GO:0098542
Tpr4g1476 217 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 7 217 - -
Tpr4g1476 217 Pfam Late embryogenesis abundant protein 82 184 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1476 Tpr-Chr4 14525932 14526884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1476 14 184 EF-hand Containing Proteins AT5G21130 21.023 2.94e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1476 - - gmx:100812905 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1476 4 14525932 14526884 Tpr4g1476 4 14525932 14526884 ECH
Tpr7g3877 7 47973778 47974968 Tpr4g1476 4 14525932 14526884 PCT