Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3836 ATGGAAGATGTAGGAAGCATTCTCCACTTTCTTGAGGACAAGACCATTTTGGTTCTTGGTGCCACTGGTTTTCTTGCAAAAATATTTTTGGAGAAGGTATTGAGAGTTCAACCAAATGTTAAAAAGCTTTTTCTTCTTTTAAGAGCATCTGATCACAAATCTGCAGCTAGTCGCTTGCAAAATGAGATATTAGCAAAGGACTTGTTTAATTTGTTAAAGGAAAAAATGGGTACAAATTTCAAGTCCTTTATTTCGGAAAAGTTGACTCTGGTGCCGGGTGATATCTCTTGTGAAGACTTGGGTTTGAAGGATTTTAATGTAAGGGAAGATATTTTTTCTCAAACAGATGTTATTATTAATTTGGCTGCCACTACTAACTTCGATGAAAGGTATGATATTGCATTGGGTCTAAATACATTTGGAGTAAAGCATGTCATGAGCTTTGCAAAACAATGTATCAAACTTAAAGTGCTTGTTCATGTATCAACTGCTTATGTATGTGGTGAAAAAAGTGGACTCATACTAGAAAGCCCTTATCACTTTGGTGATTCATTAAATGGTGTGGCTGGATTAGATATCAATGTAGAAAAGAAATTAGTAACTGAAAAATTGGGTGAGCTACGAGACAAAGGAGCCACAGAGCAAGAAATTAAAGTGGCTATGAAGGACCTAGGTATTACAAGGGCAAATGTGTATGGATGGCCAAATACATATGTGTTTACAAAGGCAGTTGGGGAGATGCTCGTGGAACAATTGAAAGAAAATTTATCTGTTGTTATTTTGCGTCCTGCCATTGTCACAAGTACATTAAAAGAACCCTTTTCTGGGTGGGTTGAAGGTATTAGAACCATTGACAGTTTAGGTGTAGCTTATGGAAAAGGAAAACTAACATGTTTCCTCGGAGATATCAATGGCGTTGTTGATGTGATACCGGCTGACATGGTGGTCAATGCAATGCTAGTGGCTATGGTGGCTCATGCAAATCAACTTAGTGATGTTGTATATCATGTGGGTTCTTCTGTCAGAAATCCATTGAGATACCTACCTCTGCATGACTATGCATTAAAATATTTCAAGGCAAAACCATGGATAAACAAAGATGGAACCGTTGTTAAAGTTGGCAAAATAGCAATATTAACTGACATGGATAGCTTCCAACGATACATTTTCATCCGCTACCTTCTTCCGTTAAAGGGACTGAAGCTTGTCAATTCAGCATTGTGCCAATATTTTGAAGGAACATATCTTGAGCTCAACAGGAAGATAAAGGTTGTGATGCGCTTGGTGGAACTTTATAGACCTTACTTATTCTTCAAGGGCATATTTGATGATATAAACCTAGAGAAGTTGCGAATGGCAGCCAGACAAAGTGGAACAGAGACAGATTTATTTTACTTCGACCCAAAAGAGATTGATTGGGAAGATTACTTTATCAACACTCATATTCCTGGTCTTGTCAAGTATATTTTCAAGTGA 1476 0.3733 MEDVGSILHFLEDKTILVLGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDHKSAASRLQNEILAKDLFNLLKEKMGTNFKSFISEKLTLVPGDISCEDLGLKDFNVREDIFSQTDVIINLAATTNFDERYDIALGLNTFGVKHVMSFAKQCIKLKVLVHVSTAYVCGEKSGLILESPYHFGDSLNGVAGLDINVEKKLVTEKLGELRDKGATEQEIKVAMKDLGITRANVYGWPNTYVFTKAVGEMLVEQLKENLSVVILRPAIVTSTLKEPFSGWVEGIRTIDSLGVAYGKGKLTCFLGDINGVVDVIPADMVVNAMLVAMVAHANQLSDVVYHVGSSVRNPLRYLPLHDYALKYFKAKPWINKDGTVVKVGKIAILTDMDSFQRYIFIRYLLPLKGLKLVNSALCQYFEGTYLELNRKIKVVMRLVELYRPYLFFKGIFDDINLEKLRMAARQSGTETDLFYFDPKEIDWEDYFINTHIPGLVKYIFK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3836 491 Pfam Male sterility protein 20 319 IPR013120 -
Tpr7g3836 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 490 IPR026055 GO:0080019
Tpr7g3836 491 CDD FAR-N_SDR_e 14 362 - -
Tpr7g3836 491 Pfam Male sterility protein 392 491 IPR033640 -
Tpr7g3836 491 CDD FAR_C 391 490 IPR033640 -
Tpr7g3836 491 PANTHER FATTY ACYL-COA REDUCTASE 3 490 - -
Tpr7g3836 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 338 IPR036291 -
Tpr7g3836 491 Gene3D - 9 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3836 Tpr-Chr7 47622548 47631312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3836 114 490 Acyl Lipid Metabolism Gene Families AT4G33790 62.865 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3836 K13356 - gmx:100788680 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3836 7 47622548 47631312 Tpr7g3836 7 47622548 47631312 ECH
Tpr7g3836 7 47622548 47631312 Tpr4g1536 4 15140676 15146476 PCT