Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3813 ATGCACACTCTATCTCCACCTCCGTCTTCCAACACTCTCAATTTCAACCACATAACACGGCCACGTTTAACCCCAAACCGGTTCGGTCCGACCCGTGTTTCTATCAAATGCGCTTACGGTTTAAACCAAGGAAGCTACGGTTTCGGTTCAAGCCGAGCCGATTGGCAAAGCTCATGCGCTATCTTATCTAGCAAAGTCGATTCACAAGAAAAACCTTCCACCGCCGCCGGCGCCGATAACATCGCCGCCATCAACGGTCATAAAACTAACATCACCGATCTACAACTTGTTCCAATCGGAAACATCGGCGGTGGAGAAATTGAAGCCGTTTCCAAGCCGCTTCTATCAAAGCCGTTAACAATCTCCGACTTAGCTCCAGCTCCGATGCACGGCTCATCTCTTCGCGTCGCGTACCAAGGCGTTCCCGGAGCTTACTCCGAAGCCGCCGCCGGAAAAGCTTATCCGAATTGCGAAGCAATTCCATGTGACCAATTCGAAGTAGCGTTTCAAGCGGTTGAGCTTTGGATCGCCGATCGTGCCGTTCTACCGGTTGAAAATTCACTCGGAGGTTCAATTCATCGGAACTACGATCTTCTCCTCCGTCACCGTCTTCACATCGTCGGCGAAGTTCAACTTCCGGTACATCACTGTCTCCTCGCTCTTCCAGGAATTAGAAAAGAATATCTAACACGAGTAATCTCACATCCACAAGCTTTATCTCAATGCGAACACACTTTAACGAAACTTGGTCTTAACGTTGCACGTGAAGCTGTCGATGACACAGCAGGTGCCGCAGAGTTTATTGCAACTAATAATCTCCGCGACACAGCTGCCATCGCCAGCTCACGTGCGGCCGAGCTATACGGTTTAAATATATTAGCAGATGGAATACAAGATGATCCGAGTAACGTAACCAGATTCGTTATGTTAGCAAGAGAACCAATAATTCCGAGAACTGATCGTCCATTTAAAACAAGTATTGTTTTCGCTCATGATAAAGGAACTTCAGTGCTTTTTAAAGTGCTTTCAGCTTTTGCGTTTAGGAATATTAGTTTAACTAAGATTGAATCAAGGCCTCATCGTAACCGTCCGATTAGACTTGTTGATGATGCTAATGTTGGAACTGCGAAACATTTTGAGTATTTGTTTTATGTTGATTTTGAAGCTTCTATGGCTGAAGTTAGAGCACAAAATGCGTTGGCTGAAGTTCAGGAGTTCACGTCTTTTTTAAGAGTTTTGGGTAGTTACCCTATGGATATGACACCATGGACTCCCTCTAGAGATGATTAA 1290 0.4566 MHTLSPPPSSNTLNFNHITRPRLTPNRFGPTRVSIKCAYGLNQGSYGFGSSRADWQSSCAILSSKVDSQEKPSTAAGADNIAAINGHKTNITDLQLVPIGNIGGGEIEAVSKPLLSKPLTISDLAPAPMHGSSLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEFIATNNLRDTAAIASSRAAELYGLNILADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSRDD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3813 429 SUPERFAMILY ACT-like 307 419 IPR045865 -
Tpr7g3813 429 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Tpr7g3813 429 Gene3D - 219 300 - -
Tpr7g3813 429 CDD ACT_CM-PDT 324 417 - -
Tpr7g3813 429 Gene3D - 129 218 - -
Tpr7g3813 429 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
Tpr7g3813 429 CDD PBP2_Ct-PDT_like 133 314 - -
Tpr7g3813 429 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Tpr7g3813 429 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Tpr7g3813 429 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 429 - -
Tpr7g3813 429 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Tpr7g3813 429 Gene3D - 319 420 - -
Tpr7g3813 429 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Tpr7g3813 429 PANTHER AROGENATE DEHYDRATASE 31 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3813 Tpr-Chr7 47241834 47244109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3813 K05359 - gmx:100797636 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3813 7 47241834 47244109 Tpr7g3813 7 47241834 47244109 ECH
Tpr7g3813 7 47241834 47244109 Tpr4g1592 4 15941537 15943137 PCT