Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1592 ATGCATACCCTCGCTTCACCTTCTTCAACTAACTATCTGAACCGGATTCGTCCCTCGTTAAACCGGTTCGGTCCTACTCAAACCAGAGGAGTAGTAACCGTTAAATGTGGTTACGGTTTCGATTATGCGAATTTCACGCAAGGTTACGGCGTTGGTTCAAACCGAGCCGATTGGCAAAGCTCATGCGCAATTTTAGCCAGCAAAGTTATTTCACAGCAAGATAACGGTCATAACAACTCCGGCAACGGAAATGAAAACAACCACGTCAGCGCCGTTAACGGTCATAACGCCTCCGTGACGGATCTTCAACTTGTTCCTGTCAGCAACAACAAGTTAATTCAACCAAAGCCGTTAACCATCACCGACCTATCTCCAGCTCCGATGCACGGCTCACAGTTACGCGTCGCTTATCAAGGCGTTCCCGGCGCGTACTCTGAAGCCGCCGCCGGAAAAGCTTATCCGAACAGTGAAGCCATGCCGTGTGATCAATTTGAAGTTGCTTTTCAATCGGTTGAGCTCTGGATCGCCGATCGTGCTGTTTTACCGGTGGAAAATTCACTCGGCGGTTCGATTCATCGAAACTACGATCTCCTCCTCCGTCACAAACTCCACATCGTCGGAGAAGTTCAACTTCCTGTTCATCACTGTCTTCTCGCTCTCCCAGGGATCCGAAAAGAGTATCTCACACGTGTGATTTCGCATCCACAAGCATTAGCACAGTGCGAAAACACGTTAACAAAACTCGGTCTCAACGTAGCGCGTGAGGCCGTCGACGATACCGCCGGAGCAGCGGAATATATCGCAACAAACAATCTCCGTGACACGGCGGCGATCGCGAGTGCACGCGCTGCGGAACTTTACGGTTTAAATATCCTTGCTGATGAAATTCAAGATGACCCGAATAACGTGACCCGATTCGTTATGTTGGCCCGAGAACCCATAATTCCGCGAACGGATCGTCCATTTAAAACGAGTATTGTTTTCGCGCATGATAAAGGAACTTCAGTGCTTTTTAAAGTGCTTTCAGCTTTTGCTTTTAGAAATATCAGCTTAACTAAGATTGAATCTAGGCCTCATCGTAGCCGTCCGATTAGAGTTGTGGATGATGAAAGTGAAGGAACTGCAAAACATTTTGAGTATATGTTTTATATTGATTTTGAAGCTTCTATGGCTGAAGTTAGAGCACAAAATGCACTTGCTGAGGTTCAAGAATTTACCTCTTTTTTAAGAGTTTTAGGGAGTTATCCTATGGATATGACACCATGGAACTCTCCTTCTACTTCTCATAGGGGAGATTAA 1299 0.4634 MHTLASPSSTNYLNRIRPSLNRFGPTQTRGVVTVKCGYGFDYANFTQGYGVGSNRADWQSSCAILASKVISQQDNGHNNSGNGNENNHVSAVNGHNASVTDLQLVPVSNNKLIQPKPLTITDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNSEAMPCDQFEVAFQSVELWIADRAVLPVENSLGGSIHRNYDLLLRHKLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALAQCENTLTKLGLNVAREAVDDTAGAAEYIATNNLRDTAAIASARAAELYGLNILADEIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDESEGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWNSPSTSHRGD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1592 432 CDD ACT_CM-PDT 323 416 - -
Tpr4g1592 432 ProSitePatterns Prephenate dehydratase signature 1. 287 309 IPR018528 GO:0004664|GO:0009094
Tpr4g1592 432 ProSitePatterns Prephenate dehydratase signature 2. 351 358 IPR018528 GO:0004664|GO:0009094
Tpr4g1592 432 ProSiteProfiles Prephenate dehydratase domain profile. 134 311 IPR001086 GO:0004664|GO:0009094
Tpr4g1592 432 Gene3D - 135 307 - -
Tpr4g1592 432 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 46 423 - -
Tpr4g1592 432 Pfam Prephenate dehydratase 135 313 IPR001086 GO:0004664|GO:0009094
Tpr4g1592 432 CDD PBP2_Ct-PDT_like 134 313 - -
Tpr4g1592 432 PANTHER AROGENATE DEHYDRATASE 46 423 - -
Tpr4g1592 432 Gene3D - 214 300 - -
Tpr4g1592 432 SUPERFAMILY Periplasmic binding protein-like II 134 317 - -
Tpr4g1592 432 Gene3D - 318 419 - -
Tpr4g1592 432 SUPERFAMILY ACT-like 306 418 IPR045865 -
Tpr4g1592 432 ProSiteProfiles ACT domain profile. 325 416 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1592 Tpr-Chr4 15941537 15943137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1592 K05359 - gmx:100800074 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3813 7 47241834 47244109 Tpr4g1592 4 15941537 15943137 PCT