Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3800 ATGAAACATTCAACTTATTTCTTGACTTTTTTGCTTCTGATTGTAGTGTTCAATGTGACTAAAGGACAACCTCTTGTCCCTGCATTGTTCATATTTGGTGACTCTGTTGTTGATGCAGGAAATAACAATAACTTAGAAACAATTGTTAAATCAAATTTCCCTCCTTATGGAAGAGACTTCAAGAATAACATGCCAACAGGGAGGTTTTGTAATGGAAAACTTGCAGCAGATTTTACAGCTGAAAACCTTGGATTTACTACTTATCCACCAGCATATCTCAACTTACAGGACAAAGGAAACAACCTCTTGAATGGTGCCAACTTTGCATCTGGTGCTTCTGGTTACTATGAACCTACAGCCAAACTATATCATGCAATTTCATTGGACCAACAGCTAGAACACTATAAAGAATGCCAGAATATATTGGTGGGAGTTGCAGGGAAAACAAATGCTTCATCAATTATATCTAGGGCTATACATCTTATTAGTGCTGGAAGCAGTGACTTTGTTCAGAATTATTACATAAATCCTCTACTTTACAAAGTCTACACTGCTGATCAATTCTCAGATATTCTCTTGCAACATTATGTCATTTTCATTCAGAATTTATATGCACTTGGGGTAAGGAAAATTGGTGTGACAACATTACCTCCATTGGGTTGTTTGCCAGCAGCCGTTACTCTCTTTGGCTCTCATAGCAATCAATGTGTGGACAGGCTAAATAATGATGCTGTTAACTTCAATAATAAGCTAAACATCACATCTCAGAACTTGCAAAAAGTGTTTAGTAACCTCACATTGGCTGTTCTTGATATCTACCAACCTCTCCATGACCTTGTCACTAAGCCTAGTGAAAATGGATTTGTAGAAGCAAGGAGAGCTTGTTGTGGAACTGGATTGATAGAGACATCTATATTGTGCAATAAGGACTCCATAGGAACATGTGCCAATGCTACTGAATATGTATTTTGGGATGGTTTTCATCCCTCTGAGGCTGCAAACAAGGTTTTGGCTGATGATTTACTGATTTCTGGCATCTCTCTCATATCCTAA 1053 0.377 MKHSTYFLTFLLLIVVFNVTKGQPLVPALFIFGDSVVDAGNNNNLETIVKSNFPPYGRDFKNNMPTGRFCNGKLAADFTAENLGFTTYPPAYLNLQDKGNNLLNGANFASGASGYYEPTAKLYHAISLDQQLEHYKECQNILVGVAGKTNASSIISRAIHLISAGSSDFVQNYYINPLLYKVYTADQFSDILLQHYVIFIQNLYALGVRKIGVTTLPPLGCLPAAVTLFGSHSNQCVDRLNNDAVNFNNKLNITSQNLQKVFSNLTLAVLDIYQPLHDLVTKPSENGFVEARRACCGTGLIETSILCNKDSIGTCANATEYVFWDGFHPSEAANKVLADDLLISGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3800 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Tpr7g3800 350 Coils Coil 237 257 - -
Tpr7g3800 350 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Tpr7g3800 350 Gene3D SGNH hydrolase 17 344 IPR036514 -
Tpr7g3800 350 PANTHER GDSL ESTERASE/LIPASE EXL3 7 349 - -
Tpr7g3800 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Tpr7g3800 350 PANTHER GDSL-MOTIF LIPASE 7 349 - -
Tpr7g3800 350 SUPERFAMILY SGNH hydrolase 29 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3800 Tpr-Chr7 47065965 47068898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3800 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 30.982 1.77e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3800 - - gmx:100792352 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3800 7 47065965 47068898 Tpr4g1606 4 16146260 16148312 PCT