Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1606 ATGGCCTATTTTCTTTTCGTTCTTTTTTTAACTATTATCAATTTAACTAAAGGGGAACCTATTGTTCCTGCACTTTTTATATTCGGTGACTCAGTTGTTGATGTCGGAAACAACAATAATCTTTTTACAGAAGTTAAATCAAATTTCTTTCCATATGGAAGAGATTTTTTAAATCACTCTCCAACGGGAAGATTCTCAAATGGAAAACTTGTTGTCGATTTGGCATCCGAACTTATTGGATTTTCCTCTTACCAACCAGCTTATCTAAATTTAAATTTCGAAGAAAACAACATCTTAAACGGTGCTAATTTTGCCTCAGCGGCCTCTGGTTACCTTGATTCCACAGCCAAGCTAAATCATGTGGTTTCACTAAGCCAACAACTGGAGTATTTCAAAGACTGTCAGAACAAATTAGTTAAAATAGTAGGCCAGGCAAATGCAACATCAATTTTAAGTGGTGCTGCTTATATTCTTGTTGCTGGAAGCGTAGATTTTGTACTCAATTACTACATGAATCCAGTGCAAGAAAAGATTTATACTCCATACCAATTCTCAAACATTCTTTTGGAATCTTATACAAATTTCATTCGGAATTTATATGAATCGGGAGCAAGGAAGGTCGGTGTAGCATCATTACCTCCGATAGGTTGTTTGCCAATAATTATCAGTTTTTTTGGCTTCCAAAATACATGTGTGGAAAACATAAACAAAGTAGCTATTGATTTCAATGGAAAACTTGACATCACTTCAAAGAAGTTGCAAAATATGCTTCCTGGCCTCAAATTGGTCATATTTGATACTTTTCAACCTCTTTATGAACTTATCACCAGACCTACTGATTATGGATTTTTTGAAGCAAGGAAGGCATGTTGTGGGACAGGCGTGCTAGAAGCTGCAAAAATATGTAATCCAATGTCCATAGGAACGTGTGTTAATGCGTCAAGATATGTATTTTGGGATAGTTTGCATCCCACGGAGGCTACAAACAAAGTGGTGATGGATCGTTTGACTCCTATTGTAATGTCCCTCGTATTACCCTAA 1041 0.3612 MAYFLFVLFLTIINLTKGEPIVPALFIFGDSVVDVGNNNNLFTEVKSNFFPYGRDFLNHSPTGRFSNGKLVVDLASELIGFSSYQPAYLNLNFEENNILNGANFASAASGYLDSTAKLNHVVSLSQQLEYFKDCQNKLVKIVGQANATSILSGAAYILVAGSVDFVLNYYMNPVQEKIYTPYQFSNILLESYTNFIRNLYESGARKVGVASLPPIGCLPIIISFFGFQNTCVENINKVAIDFNGKLDITSKKLQNMLPGLKLVIFDTFQPLYELITRPTDYGFFEARKACCGTGVLEAAKICNPMSIGTCVNASRYVFWDSLHPTEATNKVVMDRLTPIVMSLVLP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1606 346 Pfam GDSL-like Lipase/Acylhydrolase 25 335 IPR001087 GO:0016788
Tpr4g1606 346 PANTHER GDSL ESTERASE/LIPASE EXL3 19 337 - -
Tpr4g1606 346 Gene3D SGNH hydrolase 15 342 IPR036514 -
Tpr4g1606 346 SUPERFAMILY SGNH hydrolase 25 342 - -
Tpr4g1606 346 CDD SGNH_plant_lipase_like 23 336 IPR035669 -
Tpr4g1606 346 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 19 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1606 Tpr-Chr4 16146260 16148312 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1606 20 334 Acyl Lipid Metabolism Gene Families AT4G10950 34.591 2.73e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1606 - - mtr:MTR_4g056280 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1606 4 16146260 16148312 Tpr4g1606 4 16146260 16148312 ECH
Tpr7g3800 7 47065965 47068898 Tpr4g1606 4 16146260 16148312 PCT