Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3795 ATGATGCGAATTGTGGCGTTTATCTTTATACTCACTGCCGCGTTCTTATCTACGGCGGTTATATCTGGATCGCCGGCGACACTTACATTAGAAAGAGCTTTTCCGACGAATCACGGAATTGAGTTGAATCAGCTCAAAGCTAGAGACTTGTTAAGAAATCGGAGAATTTTACAGTCTTCAAACGGTGTTGTTGATTTCGATGTTCATGGTACCTTTGATCCCTTCCAAGTTGGGCTATATTTTACAAAGGTGCAGTTGGGTACTCCTCCAGTGGAATTTTACGTGCAGATTGACACCGGCAGTGATGTTCTCTGGGTCAGTTGCAGCTCCTGCAGTGGTTGTCCACAGACAAGTGGATTGCAGATTGAGCTCAACTTTTTTGACCCCGGGCATTCATCAACATCATCTTTAATCTCTTGTTCTGACCGAAGGTGCAGCAGCGGTATACAATCATCAGATGCAACCTGTTCCAGTCAGAACAATCAGTGCTCTTACACTTTCCAGTATGGAGATGGTAGTGGAACATCAGGCTATTATGTGTCAGATACGATGCATTTGGATACTATTTTCGAAGGATCCGTGACTACAAATTCTTCAGCTCCAGTAGTGTTCGGTTGTAGTAACCAACAGAGTGGAGATTTGACAAAATCTGACAGAGCAGTCGATGGTATATTTGGATTTGGTCAACAGGAAATGTCTGTGATCTCTCAGCTTTCCTCACAAGGGATTGCTCCTAGAGTATTCTCACATTGTCTTAGAGGAGATAGCACTGGTGGAGGAGTATTGGTTCTCGGTGAGATCGTGGAACCTAACATAGTTTATACTCCACTTGTTCCATCACAGCCTCATTACAACTTAAATCTACAGAGCATCTCTGTCAATGGCCAGGCATTGCAAATCGATGCATCAGTTTTTGCAACATCAAACAACCGAGGTACCATCGTTGATTCTGGAACAACTTTGGCATACCTTGCAGAAGAAGCTTATGATCCGTTTGTTAATGCGATTACTGCTACGATACCACAATCTGTACGCACTGTTGTTTCCAGGGGAAATCAGTGCTTCTTAATTACTAACAGTGTCACCGACATTTTCCCTCAAGTGAGTCTGAACTTTGCTGGTGGTGCATCACTGGATTTAAGACCACAGGACTACCTTATACAGCAGAATTCTATTGGTGGTGCAGCAGTGTGGTGTATTGGCTTTCAGAAAATCCAAGGTCAAGGGGTGACAATTCTAGGAGATCTTGTATTAAAAGATAAAATTGTTGTTTATGATCTGGCCGGTCAACGAATTGGATGGGCTAACTATGACTGTTCTTTGTCGGTTAATGTCTCTGCAGCAATTGGCACCGGCAGAAGTGAATTTGTGAATTCCGGAGAGATAAGTGGAAGCACTTCTTTACATGACGGACTTAAGTTGTCAAAGACAGGGTTTTTGGCTTTCTTTGTAACCTTGATTTGCTGCTTTGTGTTTTTATAG 1482 0.4285 MMRIVAFIFILTAAFLSTAVISGSPATLTLERAFPTNHGIELNQLKARDLLRNRRILQSSNGVVDFDVHGTFDPFQVGLYFTKVQLGTPPVEFYVQIDTGSDVLWVSCSSCSGCPQTSGLQIELNFFDPGHSSTSSLISCSDRRCSSGIQSSDATCSSQNNQCSYTFQYGDGSGTSGYYVSDTMHLDTIFEGSVTTNSSAPVVFGCSNQQSGDLTKSDRAVDGIFGFGQQEMSVISQLSSQGIAPRVFSHCLRGDSTGGGVLVLGEIVEPNIVYTPLVPSQPHYNLNLQSISVNGQALQIDASVFATSNNRGTIVDSGTTLAYLAEEAYDPFVNAITATIPQSVRTVVSRGNQCFLITNSVTDIFPQVSLNFAGGASLDLRPQDYLIQQNSIGGAAVWCIGFQKIQGQGVTILGDLVLKDKIVVYDLAGQRIGWANYDCSLSVNVSAAIGTGRSEFVNSGEISGSTSLHDGLKLSKTGFLAFFVTLICCFVFL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3795 493 Pfam Xylanase inhibitor C-terminal 283 435 IPR032799 -
Tpr7g3795 493 PRINTS Pepsin (A1) aspartic protease family signature 86 106 IPR001461 GO:0004190|GO:0006508
Tpr7g3795 493 PRINTS Pepsin (A1) aspartic protease family signature 313 324 IPR001461 GO:0004190|GO:0006508
Tpr7g3795 493 PRINTS Pepsin (A1) aspartic protease family signature 411 426 IPR001461 GO:0004190|GO:0006508
Tpr7g3795 493 ProSiteProfiles Peptidase family A1 domain profile. 80 435 IPR033121 -
Tpr7g3795 493 Gene3D Acid Proteases 267 445 IPR021109 -
Tpr7g3795 493 Gene3D Acid Proteases 61 266 IPR021109 -
Tpr7g3795 493 PANTHER ASPARTYL PROTEASES 6 456 IPR001461 GO:0004190|GO:0006508
Tpr7g3795 493 SUPERFAMILY Acid proteases 75 442 IPR021109 -
Tpr7g3795 493 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 6 456 - -
Tpr7g3795 493 CDD pepsin_A_like_plant 80 439 IPR034161 -
Tpr7g3795 493 Pfam Xylanase inhibitor N-terminal 80 265 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3795 Tpr-Chr7 47010216 47015083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3795 54 440 Miscellaneous Gene Families AT1G44130 27.861 2.61e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3795 - K00924 gmx:100791299 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3795 7 47010216 47015083 Tpr4g1616 4 16332739 16352006 PCT