LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g2144	ATGGCCTCAGCTTCGAAAAAGACGGCGCCACCATCGTCTTCTCCTTGTTGTCCCCCTGTCGACTCTCCCCGCTTAGCCGTCGTCCAATCCGACCGCGTTCCTAACAGCACCGTTGCCTTGATTCGTCCTCTCGATTCTCTTCCAGAACCTTCCACCACCAATGCCCCTTCTGCTAAGGGAATCACTTCAATGACAAGGCCTCAGTCAAGCCATCCTTTGGACCCGTTAACTGCGGCCGAAATTTCCGTGGCAGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCAGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTGCTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTTTTTCCACCTTTCCAACCATCATTACTTCCTAGAAGTAAAGGAGGGCCTGTAATTCCCACTAAACTCCCTCCAAGATGCGCTAGACTTGTTGTTTACAATAAGAAATCAAATGCGACTGCTCTGTGGATTGTCGAATTATCACAAGTGCATGCTGTAACTCGAGGTGGCCATCATCGAGGAAAAGTAATTTCTTCACGTGTTGTTCCCGATGTTCAGCCTCCAATGGATGCTGAGGAATATGCAGAATGCGAGGCTGTTGTTAAAAGTTTCCCTCCTTTTATAGATGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGTTGGTTATCACAGTGAAGCTGATGCTCCTGGTCAAAGACTTGCTAAACCTCTCCTATTTTGTCGATCTGAGAGTGACTGCCCTATGGAAAATGGTTATGCCCGCCCAGTTGAGGGTATCTATGTTCTCGTTGATATGCAAAACATGAAGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAACTATACTCCTGGTGAATCCAGAGGTGGCTCCGATAGAAGTGATGTCAAACCCTTACAAATTATTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGGTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGGTTCACACCCAAAGAAGGGTTGATTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGAGAAGGCCTGTTGCTCATAGGCTGAGTTTTGTGGAAATGGTTGTACCCTATGGAGATCCAAATGAACCTCATTATAGGAAAAATGCTTTTGATGCCGGGGAAGATGGCTTGGGGAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCTCACTTTACAAATTTCACTGGTGGGGTGGAAACCATTGAAAATTGTGTATGTATGCATGAAGAGGATCACGGGATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGGAGGTCTAGAAGACTTTCAGTTTCTTTTGTATGCACGGTGGCCAACTATGAGTACGCATTTTTTTGGCATTTTTATCAGGATGGAAAGATTGAAGCCGAAGTCAAGCTGACTGGAATTCTCAGCTTAGGCGCCTTGATGCCAGGAGAATATCGAAAATATGGAACCATGATTGCACCAGGGCTATATGCTCCAGTTCATCAACACTTTTTCGTTGCTCGCATGGACATGTCTGTTGATTCTAGACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAAGAACCCGGTGAGAATAATATTCACCACAATGCATTCTATGCCGAAGAGACTTTGCTCAGATCTGAATCGGAAGCAATGCGTGATTGCAATCCTTTAACTGCTCGACATTGGATTGTAAGGAACACAAGAACTGGCAACAGAACCGGACAATTGACAGGCTACAAGCTGGTACCAGGCTCAAACTGCTTGCCATTGGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATGTTTGGGTAACAGCATATTCACGTGATGAAATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGCTGGGGAAGGACTAGCTACATGGATTAAGCAAAACCGGTCTTTGGAAGAAACTAATATAGTTCTTTGGTATGTATTTGGAATCACGCATGTTCCTCGTCTAGAAGACTGGCCTGTTATGCCAGTGGAACACATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCCCCTGCAGTAGATGTCCCGCCTAATTCATGTGAAGTGGAATCTAAAGACACTGACATCAAGGATAATGGTGCTTCGAAGCCAATTCAGAGCGGTTTAGTGTCAAAGCTTTAG	2304	0.4466	MASASKKTAPPSSSPCCPPVDSPRLAVVQSDRVPNSTVALIRPLDSLPEPSTTNAPSAKGITSMTRPQSSHPLDPLTAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPRSKGGPVIPTKLPPRCARLVVYNKKSNATALWIVELSQVHAVTRGGHHRGKVISSRVVPDVQPPMDAEEYAECEAVVKSFPPFIDAMKKRGIEDMDLVMVDPWCVGYHSEADAPGQRLAKPLLFCRSESDCPMENGYARPVEGIYVLVDMQNMKVIEFEDRKLVPLPPVDPLRNYTPGESRGGSDRSDVKPLQIIQPEGPSFRVNGYYVEWQKWNFRIGFTPKEGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCMHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFVCTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALMPGEYRKYGTMIAPGLYAPVHQHFFVARMDMSVDSRPGEALNQVVEVNMKVEEPGENNIHHNAFYAEETLLRSESEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYSRDEMFPGGEFPNQNPRAGEGLATWIKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPNSCEVESKDTDIKDNGASKPIQSGLVSKL*	768

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g2144	767	SUPERFAMILY	Amine oxidase N-terminal region	195	312	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	PANTHER	COPPER AMINE OXIDASE	34	763	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	MobiDBLite	consensus disorder prediction	47	72	-	-
	Tpr7g2144	767	Pfam	Copper amine oxidase, enzyme domain	325	733	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	MobiDBLite	consensus disorder prediction	44	73	-	-
	Tpr7g2144	767	PANTHER	AMINE OXIDASE	34	763	-	-
	Tpr7g2144	767	Gene3D	-	55	198	-	-
	Tpr7g2144	767	MobiDBLite	consensus disorder prediction	1	23	-	-
	Tpr7g2144	767	Gene3D	-	200	303	-	-
	Tpr7g2144	767	SUPERFAMILY	Amine oxidase N-terminal region	69	197	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	Gene3D	Copper amine oxidase, catalytic domain	312	738	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	Pfam	Copper amine oxidase, N2 domain	71	169	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	MobiDBLite	consensus disorder prediction	744	767	-	-
	Tpr7g2144	767	Pfam	Copper amine oxidase, N3 domain	196	299	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Tpr7g2144	767	SUPERFAMILY	Amine oxidase catalytic domain	319	738	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g2144	Tpr-Chr7	27765578	27772460	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g2144	K00276		-	gmx:100798722	1377.84

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr5g2887	5	52006056	52008370	Tpr7g2144	7	27765578	27772460	PCT