Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2887 ATGATGAAAAGTCCTAAGTTGGAAGAGGAAAGGAGGCTTGAAGAGGAGCTCTTGATACCAATCCTAATGGGAGAGCATGTGATAAAGTTGGCGGAGGAAGCAAAATCATCCAAGGTAGAATGTCGAGAACTGGCTAAGAAGGTGGAGGTACTCTGCAACAGTCTCCGAGGTGTCGTCCGAGTGGTTTCAGGGAACCACCAATCGTTGAACGAGAGACCGATCCATCGCATGGTGAAGGAACTATTGAAGAATTTGGAAAAAACGCTCGCGCTTGTGCGAAGATGTAAGAATCAAGTTGGTGTCGGTGTACTAAAACATGTGTTAACGATAAGGAGTACCAGTGATTTTCGAAAAGTCTGGAATCTTCTGGAATCTTCGAACGGCGATATGATGTGGTTGCTGAGCATTTTTGAGTCTAGAGGGACTAATATTGCGCTCTCTCCTATTACTAATAATGATCCAATCTTGGCGTGGGTGTGGACTTATATTTATACCCTTCAGCTTGGTAACCCTAACGATTGTGCTGATGCTGCAACGGAACTAGGTGCCCTCGCTCAAATTACTGACCGGAACAGGTTCATCATCATGGAGGAAGGTGGTGTTTTGCCTCTGCTCAAGGTTCTTAAAGATTCTGCTTTCCCTGATTGTCAAGTTGCAGCTGCCAATGCTCTTGCTAACCTTGTTTCCGATGATCAACAAAAGATCGTTGCATTCCTTCTCAACAACCTTGCTGTTCCTGTTATTGTTCAGGTTCTATCGGATGCTGTATTTAGAGTCCGTGTTTCTGTTGCTAATTTGGTCAGTGCTATGGCTGATCAAGAGCCTCTTGCTCGCGAGGAGTTTATTAAGGCTAATGTGACGAAACCTCTTGTATCATTGTTGTCAATTGATACTGTTCTTGCTGAACCTATCGCTGCTCGAAATGGTATTCATTCGGTGGTTCAAAATTTATCTGAGGCTGATTCTGATGGAAGCAGTGGCAGAGGAAGAGAGGCTGATCAGAGCCCTGAATTGAGGAATGATGTTAAAGTTAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTTGGCTTGCAAGAAGATTACTGAGACTAAAGGCTTGCTTTGTCTGGCTAAGATTGTTGGGTCTGAGAGTGGAGAATTGAGACTCAATTGTCTCATGGCTGTTATGGAAATTGCGGCCGTGGCAGAATCCAACGTTGAACTTAGAAGGGGCGCTTTAAAATCCACTGCGCCCGCGTCAAAGGCGGTTTTGAATCAGCTTTTAAGAGTGATTCGACAAGAGAATGATTCTTCGTTGCTGATTCCTGCCATCAAGTCAATTGGCTCCTTGGCCAGAAACTTTCCTGGAAAGGTTCCTCATGTTCTCGGTCCTTTAGTTACACACCTTGGAAACAAGGATATGAATGTGGTAAGTGAAGTTATCATTGCCTTGGTAAAATTTGTGTGTGTCGAAAATTACAACTGCGTCGACCATTCTAAGGTAATACTTGAGCTTGATGGAATTCCTAAGCTAATGATTCTTTTAAAGATAAATGGTCGCCAACAAGTGTACGGCCTAAAATTACTTTGTTATCTCACCTTAAATGTTGGTAATAGTAAGGTTCTCGAGCAAGAACGTGTATTGAGTACGTTAGACAAGCTTGGTCATCTTGTTCTAGCTCAAAATCCTGATTTGAAGGAACTATTTGCAAAGGCGATTCATCACCTCACTCTTTATCAGCCAGGAGTTCAATTCCACAGACAGCCTTTGGTATATGGACTATAA 1776 0.4319 MMKSPKLEEERRLEEELLIPILMGEHVIKLAEEAKSSKVECRELAKKVEVLCNSLRGVVRVVSGNHQSLNERPIHRMVKELLKNLEKTLALVRRCKNQVGVGVLKHVLTIRSTSDFRKVWNLLESSNGDMMWLLSIFESRGTNIALSPITNNDPILAWVWTYIYTLQLGNPNDCADAATELGALAQITDRNRFIIMEEGGVLPLLKVLKDSAFPDCQVAAANALANLVSDDQQKIVAFLLNNLAVPVIVQVLSDAVFRVRVSVANLVSAMADQEPLAREEFIKANVTKPLVSLLSIDTVLAEPIAARNGIHSVVQNLSEADSDGSSGRGREADQSPELRNDVKVSCAKALWKLSKGCLLACKKITETKGLLCLAKIVGSESGELRLNCLMAVMEIAAVAESNVELRRGALKSTAPASKAVLNQLLRVIRQENDSSLLIPAIKSIGSLARNFPGKVPHVLGPLVTHLGNKDMNVVSEVIIALVKFVCVENYNCVDHSKVILELDGIPKLMILLKINGRQQVYGLKLLCYLTLNVGNSKVLEQERVLSTLDKLGHLVLAQNPDLKELFAKAIHHLTLYQPGVQFHRQPLVYGL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2887 591 SUPERFAMILY ARM repeat 169 576 IPR016024 -
Tpr5g2887 591 Pfam Armadillo/beta-catenin-like repeat 189 228 IPR000225 GO:0005515
Tpr5g2887 591 Gene3D - 20 136 IPR036537 GO:0007166
Tpr5g2887 591 PANTHER ARMADILLO REPEAT ONLY 4 8 587 - -
Tpr5g2887 591 Coils Coil 78 98 - -
Tpr5g2887 591 Gene3D - 300 582 IPR011989 -
Tpr5g2887 591 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 8 587 - -
Tpr5g2887 591 Gene3D - 166 299 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2887 Tpr-Chr5 52006056 52008370 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2887 - - gmx:100813824 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2887 5 52006056 52008370 Tpr5g2887 5 52006056 52008370 ECH
Tpr5g2887 5 52006056 52008370 Tpr7g2144 7 27765578 27772460 PCT