Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1020 ATGAATCAAGTTGATAATGGTATTATAAATCCCAAAGATGAAATTGAAGAATCTAATGGGAGTCAAGTGAAGGGGTTTGCTTCTATAGATATTCCACATACTCAAGAAACAATTCCAACCAATGAAAATCTTCACAGAAATTTCCTCAAATTTGGTTCTGCATCTGCTAAATTCAAACAGTTTGCTACTGAGAAAGACCAGATTTCACAGTCTGTGCCTTCTCCGCATTCCGATAGCCTAAAATCACGTTTTGGAACGATGTTCGGTCAGAAACTTGAATGGAATTCAGTCAAGAAAATGTGCATGGAATGGATCAAAAACCCAATGAACATGGCCCTTTTCGCGTGGATAATCTGTGTCGCTGTTTCGGGTGCAATTCTGTTCTTTGTCATGACAGGAATGTTGAATAATATGCTAAAAACAAAGTCTGAGAGGAACACATGGTTTGAAGTAAATAACCAAATACTAAATGCACTCTTCACACTTATGTGTTTGTATCACCATCCAAAGAGGATCCACCATCTTGTTCTTTTGTGCAGATGGAGACCAAATGACATTTATAAACTTAGAATGATTTACTGCAAAAATGGAACTTATAAGCCTCATGAATGGACACATATAATGGTAGTGGTTATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTAGTCTAAACTTAGGATATAAAAGGTCTGATAGACCTGCTATTGGAGTTGGAATTACTATATCCGTTGCAATTGCAGCACCGGCAATAGCTGGATTGTACACTATTCTTAGTCCACTTGGAAAAGACTATAATGATTGTATGATGGATGAGGAATCACAGGTTCAATTTGAGAAAAATTATGCATTTGCATCTAAAGATCAACAAGGCGGAGTTATAGAAAATAGACCAAGTTGGAGTGGAGGAATACTTGACATTTGGAATGATTTATCTTTATCATATCTCTCACTTTTCTGCACTTTTTGTGTCTTTGGATGGAACATGGAAAGACTTGGATTTGGAAACATGTATGTTCATATAGCTACTTTCATGCTATTTTGTATGGCTCCTTTTTGGATATTTGTATTAGCTTCTGTTAACATTGATGATGACAATGTTAGACAAGCTCTAGTAGCTTTTGGAATCATTCTTTGTTTTTGTGGTTTCCTTTATGGTGGATTTTGGAGGATTCAAATGAGAAAGAGGTTTAATTTACCTGCTTATGATTTCTGTTTTGGAAAACCTTCAGTTTCTGATTGTGCACTTTGGTTATGCTGTTGTTGGTGCTCTCTTGCACAAGAAGCTAGGACTGGGAATAGTTATGATATCTTGGAAGATAAGCTATGTATGAAAGAAATTGATACTTGTGATCAAGTTTCAATTTCATCTTTGGATAGAGAAGATGTAGTAGTATCAACCAAATCTGGCACAAGTTCTTCTCTTGAAAGAGATAAAGATGGAACAATGAATCCACCAATAGCTTTAGTAATACAAAAAGAAGGTTCTGCATAA 1503 0.3566 MNQVDNGIINPKDEIEESNGSQVKGFASIDIPHTQETIPTNENLHRNFLKFGSASAKFKQFATEKDQISQSVPSPHSDSLKSRFGTMFGQKLEWNSVKKMCMEWIKNPMNMALFAWIICVAVSGAILFFVMTGMLNNMLKTKSERNTWFEVNNQILNALFTLMCLYHHPKRIHHLVLLCRWRPNDIYKLRMIYCKNGTYKPHEWTHIMVVVILLHVNCFAQYALCSLNLGYKRSDRPAIGVGITISVAIAAPAIAGLYTILSPLGKDYNDCMMDEESQVQFEKNYAFASKDQQGGVIENRPSWSGGILDIWNDLSLSYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFVLASVNIDDDNVRQALVAFGIILCFCGFLYGGFWRIQMRKRFNLPAYDFCFGKPSVSDCALWLCCCWCSLAQEARTGNSYDILEDKLCMKEIDTCDQVSISSLDREDVVVSTKSGTSSSLERDKDGTMNPPIALVIQKEGSA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1020 500 Pfam Protein of unknown function (DUF2985) 103 181 IPR021369 -
Tpr7g1020 500 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 495 - -
Tpr7g1020 500 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g1020 500 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 302 434 IPR006461 -
Tpr7g1020 500 Pfam PLAC8 family 303 433 IPR006461 -
Tpr7g1020 500 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1020 Tpr-Chr7 9687213 9690131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1020 - - mtr:MTR_3g072070 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1020 7 9687213 9690131 Tpr4g2325 4 24619146 24622063 ECH
Tpr7g1020 7 9687213 9690131 Tpr7g1020 7 9687213 9690131 ECH
Tpr7g1020 7 9687213 9690131 Tpr4g2325 4 24619146 24622063 PCT