Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2325 ATGGTTTCGGTTGATAATAATGGTAAAGATGTAATTGAGGAATGTAACAATAATGGAAGTAAAGTGACAGAGTTTACTTCCATAGATATTTCAAGTTCTCGAAGAACGTTGGTGACTGGTGAAAATCCTGGTAGAAAGTTCCCGGGTACGTTGAGTTCTGTTCCTAATAGGATCAATTTCTTGAAATTTGGTTCTGCGTCTGCTAAGTTCAGGCGGCTTGCTACTCAGATGGATCAGGCTTCACAATCTGTGCCTTCTCCAAGTTCACGTAGTTTAAGAGAACGGTTTAGTGGCATGTTTACTAAGAAACTCGACTGGGATTCGATTAAGAAGATGGCGATAGAATGGATTAGGAACCCAATGAACATGGCCCTTTTTGCGTGGATCTTAGTTGTTGCCATTTCCGGTGCAATCCTTTTCCTTGTCATGACTGGCATGTTGAATGCTGCGATTCCGAAGAAAGAGACAAGGAATGCATGGTTTGAAGTAAACAATCAAATACTCAACGCGCTGTTTACGCTGATGTGTTTGTATCAGCATCCGAAGAGATTCTACCACCTTGTACTTCTGTGTAGATGGAGTCCAACAGATATCATCAAACTTAGAAAGGAGTATTGCAAAAATGGAACTTATAAGCCTCATGAATGGACACACATGATGGTAGTGGTAATTCTCGGTCATGTGAACTGTTTCGCTCAATATGCACTTTGCGGTCTAAACATAGGGTATAAAAGATCTCAGCGCCCAGCCATCGGAGTTGGAATATGTATATCTTTTGCAATCGGTGCACCTGCAATTGCTGGTCTATATACCATTCTTAGTCCACTAGGTAAAGATTATGATTCTGGATCGGACGAAGAATCACAGGTTCAAATTTCTGCTGCTCAAAAGCGAGAGCAAATGAAAGTGATGTCATTTGAGAGGAAATATTCATTTGCATCAAAAGATCAACGAAGGACTGTCGTAAGTAGACCACAGTGGAGTGGAGGAATACTTGACATTTGGGATGATATCTCTCATGCATATCTATCACTTTTCTGTACTTTTTGTGTCTTCGGTTGGAATATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCCACTTTTATGCTGTTCTGTATGGCTCCATTTTGGATTTTCATCTTAGCTGCTGTTAATATCGAGGATGACACCGTTAGGCAAGCTTTAGTAGGTGCTGGAATCGTTCTATGTTTTTTCGGTATGCTCTATGGTGGATTTTGGAGAATCCAAATGAGAAAGAGGTACAATTTGCCTACTTATGACTTCTGTTGCGGCAAGCCTACAGTTTCTGATTGCGCACTTTGGCTATGTTGTTGTTGGTGCTCTCTTGCTCAAGAAGTACGGACGGGGGATGCCTATCATATTGTAGATGATAAATTCTTCAGCAAAGAAATGAACACTGTTGACCAACCACCGATTTCACCTTTGCATCGCGAAGGGGTTGCATCAAATAAATCTGGCACAAGTTCCCCTCTTGGGGTCAATTCTTCTCCTTCTAAATTCAAGCCGTCGAGTCCTCTAAGTTCTAGCAGTTTCTTTACAAATAGTTCAGATGGTCCACTGCCTAGTGTAAAAGAAGGGGTATCTGAAAAAGATAGAGATGTAACAATGAATCCACCAACTCCACCATTGATACAAAGAGAATCTCCTTAG 1680 0.4107 MVSVDNNGKDVIEECNNNGSKVTEFTSIDISSSRRTLVTGENPGRKFPGTLSSVPNRINFLKFGSASAKFRRLATQMDQASQSVPSPSSRSLRERFSGMFTKKLDWDSIKKMAIEWIRNPMNMALFAWILVVAISGAILFLVMTGMLNAAIPKKETRNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWSPTDIIKLRKEYCKNGTYKPHEWTHMMVVVILGHVNCFAQYALCGLNIGYKRSQRPAIGVGICISFAIGAPAIAGLYTILSPLGKDYDSGSDEESQVQISAAQKREQMKVMSFERKYSFASKDQRRTVVSRPQWSGGILDIWDDISHAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGAGIVLCFFGMLYGGFWRIQMRKRYNLPTYDFCCGKPTVSDCALWLCCCWCSLAQEVRTGDAYHIVDDKFFSKEMNTVDQPPISPLHREGVASNKSGTSSPLGVNSSPSKFKPSSPLSSSSFFTNSSDGPLPSVKEGVSEKDRDVTMNPPTPPLIQRESP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2325 559 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 555 - -
Tpr4g2325 559 Pfam Protein of unknown function (DUF2985) 115 193 IPR021369 -
Tpr4g2325 559 MobiDBLite consensus disorder prediction 489 559 - -
Tpr4g2325 559 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 555 - -
Tpr4g2325 559 MobiDBLite consensus disorder prediction 490 531 - -
Tpr4g2325 559 Pfam PLAC8 family 327 457 IPR006461 -
Tpr4g2325 559 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 326 458 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2325 Tpr-Chr4 24619146 24622063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2325 - - gmx:100795088 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1020 7 9687213 9690131 Tpr4g2325 4 24619146 24622063 ECH
Tpr4g2325 4 24619146 24622063 Tpr4g2325 4 24619146 24622063 ECH
Tpr7g1020 7 9687213 9690131 Tpr4g2325 4 24619146 24622063 PCT