Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0998 ATGGAGAGTGTCAAAACCAATTATAAATACTCATCCATCTTCATAGCCATTTTTATTCTCTTATCATCTCCCACATTGTCTTTAGCAAATGCTAAAACTCACGAGCACGAATTTGTCGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACTCACAACACCATAACCGTGAATGGGCAATTCCCTGGCCCAACTTTGGAAATTAACAATGGAGACACTTTGGTTGTCAAAGTCACTAACAAAGCTCGTTACAATGTCACCATTCATTGGCATGGTGTTCGACAAATGAGAACAGGATGGGCAGATGGTCCAGAATTTGTGACACAGTGTCCCATTCGTCCTGGAGGAAGTTACACCTACCGTTTCACTGTTAATGGACAAGAAGGGACACTTTGGTGGCATGCTCATAGTTCATGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTCGTCCTAGGGAAGGAGAGTACTACCCTTTTCCTAACCCAACCCGCGACACACCCATTCTTTTAGGGGAATGGTGGGACACAAACCCAATAGATGTTGTGAGGCAGGCCCTAAGAACAGGAGCAGCTCCAAATATATCTGATGCATACACTATCAATGGTCAACCCGGTGACTTTTACAAATGCTCTACTAAAGGCACAACCATCATTCCAATACAATCTGGCGAGACAAATCTCATCAGAGTGATCAATGCAGCACTCAACCAACCACTTTTCTTCACAATCGCCAACCACAAACTAACGGTGGTTGGCGCTGATGCCTCTTACCTCAAACCTTTCACCACCAACATCCTCATGTTAGGACCGGGCCAAACCACCGATGTCTTAATAACCGCAAACCAACCACCTTCTCGATACTACATAGCTGCTCGGGCTTACCAATCCGCGCAAAATGCACCGTTTGATAACACTACAACCACCGCCATACTCCAGTACCACAATTCAATCAAAACAAAACCAATCATGCCACCACTCCCTGCTTATAATGACACCAATGTAGTTACTAAATTTAGTAGAAGTTTTTTTAGTCAAAGAAAAGTTGAAGTTCCAACCGAAATCGACGAAAATCTCTTTTTCACAATTGGTTTAGGACTCAACAATTGTCCAAAAAATTTCAGGAAAAGAAGGTGTCAGGGTCCTATTAACGGAACACGCTTCACTGCAAGTATGAACAATGTATCTTTTACTCTTCCAAACAACATTTCAATTTTGCAAGCTCATTACGATAGAATTCCCGGAGTTTTCACCACTGATTTCCCCGCAAACCCACCTGTAAAATTCGATTACACCGGTAACGTGAGCCGTTCGCTTTGGCAACCTACACCGGGGACTAAAGCTTATAAGTTGAAGTTTGGATCAAGGGTTCAGATTGTGTTACAAGATACAAGTATTATCACACCTGAGAATCACCCAATTCACCTTCATGGATATGATTTCTACATTGTTGCCGAAGGGTTTGGAAATTTTAACCCTAACAAAGATACATCAAAATTCAACCTTGTTGATCCACCTATGAGAAATACAGTAGCTGTACCTGTCAACGGTTGGGCCGTTATCCGATTTGTTGCTGATAATCCAGGTGCTTGGATTATGCATTGTCACTTGGATGTTCACATTGGTTGGGGTTTGGCCACTGTGCTGTTAGTAGAAGATGGAGTTGGAGAATTGCAATCCATAGAGCCACCTCCACTGGACCTGCCTCTCTGTTAG 1716 0.4295 MESVKTNYKYSSIFIAIFILLSSPTLSLANAKTHEHEFVVEATPVKRLCKTHNTITVNGQFPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEGTLWWHAHSSWLRATVYGALIIRPREGEYYPFPNPTRDTPILLGEWWDTNPIDVVRQALRTGAAPNISDAYTINGQPGDFYKCSTKGTTIIPIQSGETNLIRVINAALNQPLFFTIANHKLTVVGADASYLKPFTTNILMLGPGQTTDVLITANQPPSRYYIAARAYQSAQNAPFDNTTTTAILQYHNSIKTKPIMPPLPAYNDTNVVTKFSRSFFSQRKVEVPTEIDENLFFTIGLGLNNCPKNFRKRRCQGPINGTRFTASMNNVSFTLPNNISILQAHYDRIPGVFTTDFPANPPVKFDYTGNVSRSLWQPTPGTKAYKLKFGSRVQIVLQDTSIITPENHPIHLHGYDFYIVAEGFGNFNPNKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVEDGVGELQSIEPPPLDLPLC* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0998 571 CDD CuRO_1_LCC_plant 36 152 IPR034288 GO:0005507
Tpr7g0998 571 Pfam Multicopper oxidase 166 316 IPR001117 -
Tpr7g0998 571 SUPERFAMILY Cupredoxins 352 571 IPR008972 -
Tpr7g0998 571 PANTHER MULTI-COPPER OXIDASE 8 571 IPR045087 -
Tpr7g0998 571 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Tpr7g0998 571 PANTHER LACCASE 8 571 - -
Tpr7g0998 571 CDD CuRO_2_LCC_plant 168 314 IPR034285 -
Tpr7g0998 571 CDD CuRO_3_LCC_plant 416 554 IPR034289 GO:0005507
Tpr7g0998 571 TIGRFAM laccase: laccase 31 571 IPR017761 GO:0046274|GO:0048046|GO:0052716
Tpr7g0998 571 Gene3D - 21 152 IPR008972 -
Tpr7g0998 571 Pfam Multicopper oxidase 40 154 IPR011707 GO:0005507
Tpr7g0998 571 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
Tpr7g0998 571 Gene3D - 164 349 IPR008972 -
Tpr7g0998 571 Gene3D - 375 571 IPR008972 -
Tpr7g0998 571 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Tpr7g0998 571 SUPERFAMILY Cupredoxins 160 344 IPR008972 -
Tpr7g0998 571 Pfam Multicopper oxidase 421 553 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0998 Tpr-Chr7 9394300 9398392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0998 K05909 - gmx:547704 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0998 7 9394300 9398392 Tpr4g2342 4 24793462 24797333 ECH
Tpr7g0998 7 9394300 9398392 Tpr7g0998 7 9394300 9398392 ECH
Tpr7g0998 7 9394300 9398392 Tpr4g2342 4 24793462 24797333 PCT