Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0982 ATGACAAATTTATTCGAATCCCTCTTCAAAGACAGAAAGTCTCCTGTCATTTTCACCCTCTTTACATTGCTTATTTGTGTCATGACACTGTTTGTCGCCAACACCTCTACATTCACGACCTCTGATCCGATTTCCTTCTACCCTGATGATATAAAAGCGCAGCTACCGCTTGAACACGATGCCCTTCCAGTACTCCCAGATTCAAAAGATCAACAAGAACACCGTGCCCCTCCAGTACTCCCAGATTCAAAAGATCAACAAGAACCGCCAAAAGATCATCAAGAACTGCCACATGAAGGATTGCTTCATTGGGAAAAGGCTTTTGATAATAATGTTTCTGTTGATCTGAATATGAATTGGAAGCTTTGTAAAGGTGCTGTGATGGTAGATTATATGCCATGTTTGGATAATCTTAAGGCCATTAAGGCTTTAAAGTCAAGGAGGCACATGGAGCACAGGGAAAGACATTGTCCTAAATCTGTTCCTCGTTGTTTGTTACCCCTTCCTAAAGGATATAAAGTCAAGGTTGCATGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTACCTCATCCAAAGCTTGTTGAATACAAGAAGGAACAAAATTGGGTGGTGAAGACAGGTGAATATCTTGTATTTCCAGGAGGTGGTACCCAATTCAAAGAAGGAGTTAACCATTATATTAATTTCATAGAGAAGACTCTACCAGCAATCCAATGGGGAAAGAATATAAGGGTTGTGCTCGATGCTGGTTGTGGAGTTGCTAGCTTTGGCGGCTATCTTCTAGACAAGAATGTTATTACCATGTCATTTGCACCAAAGGATGAGCATGAAGCTCAGATACAATTTGCTTTGGAAAGAGGAATTCCAGCAACTCTTTCTGTCATTGGAACACAAAAGTTGACATTTCCCGATAATGGATTCGATTTGATCCATTGCGCAAGATGCAGGGTGCACTGGGATGCCGATGGCGGAAAGCCATTATATGAACTCAATAGGATTCTTAGGCCTGGTGGTTACTTTGCATGGTCAGCTACACCAGTTTATCGCAACGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACTGTAACAACAAATATGTGTTGGACTGTTGTGGCTAAGACTTTTGATTCATCTGGAATTGGACTTGTTATATACCAAAAGCCAATCTCATCTTCCTGCTACGAAAAACGCAAAAAGAACAATCCTCCTATATGTAAAAATAATGAAAGGAACCAAATCTCATGGTATACCAGACTGAGTAGTTGCCTTATTCCTCTACCCGTGGATGATGCAGCGAGATGGCCCGTGTCTTGGCCTAATAGGCTTACTAGTATACCTCCTAGCTTATCTTCTCAAGTAGATGCCGGCAACATGTTCGACAAGGATACTAAACATTGGTCTAGAATAGTTTCAGACATTTATATGGAAGCTCCTATAAATTGGTCTACTGTTCGAAACGTAATGGACATGAATGCCGGTTATGGAGGATTTGCTGCAGCTCTTATTGATCGACCAGTTTGGGTGATGAATGTAGTGCCAATCGATATGCCAGATACTCTTACTGTCATATTTGACAGAGGCTTAATAGGAACCTATCATGATTGGTGTGAATCCTTGAGTACCTATCCTCGCACATATGATCTTATTCATTCAAGCTTCCTCTTCAAAAACCTCGACAAAAGATGTGACATTGTAGATGTGGTTGTGGAGATAGATCGCATATTGAGACCAGATGGATATCTTTTGGTTCAGGATTCAATGGAAGGAATTAGAAAGTTGGGTTCAATATTGAATACACTTCATTGGTCTGTTACATCTTATCAAAATCAGTTTCTTGTTGGTAGGAAGAGCTTCTGGCGTCCAAAACCATAG 1884 0.4076 MTNLFESLFKDRKSPVIFTLFTLLICVMTLFVANTSTFTTSDPISFYPDDIKAQLPLEHDALPVLPDSKDQQEHRAPPVLPDSKDQQEPPKDHQELPHEGLLHWEKAFDNNVSVDLNMNWKLCKGAVMVDYMPCLDNLKAIKALKSRRHMEHRERHCPKSVPRCLLPLPKGYKVKVAWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKTGEYLVFPGGGTQFKEGVNHYINFIEKTLPAIQWGKNIRVVLDAGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLYELNRILRPGGYFAWSATPVYRNDERDQKVWNAMVTVTTNMCWTVVAKTFDSSGIGLVIYQKPISSSCYEKRKKNNPPICKNNERNQISWYTRLSSCLIPLPVDDAARWPVSWPNRLTSIPPSLSSQVDAGNMFDKDTKHWSRIVSDIYMEAPINWSTVRNVMDMNAGYGGFAAALIDRPVWVMNVVPIDMPDTLTVIFDRGLIGTYHDWCESLSTYPRTYDLIHSSFLFKNLDKRCDIVDVVVEIDRILRPDGYLLVQDSMEGIRKLGSILNTLHWSVTSYQNQFLVGRKSFWRPKP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0982 627 PANTHER PMT16, PUTATIVE-RELATED 4 626 - -
Tpr7g0982 627 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 626 IPR004159 GO:0008168
Tpr7g0982 627 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 130 614 IPR004159 GO:0008168
Tpr7g0982 627 MobiDBLite consensus disorder prediction 65 95 - -
Tpr7g0982 627 Gene3D Vaccinia Virus protein VP39 458 614 IPR029063 -
Tpr7g0982 627 CDD AdoMet_MTases 248 342 - -
Tpr7g0982 627 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 456 597 IPR029063 -
Tpr7g0982 627 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 154 359 IPR029063 -
Tpr7g0982 627 Gene3D Vaccinia Virus protein VP39 221 417 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0982 Tpr-Chr7 9131878 9135679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0982 - - mtr:MTR_3g071530 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0982 7 9131878 9135679 Tpr7g0982 7 9131878 9135679 ECH
Tpr7g0982 7 9131878 9135679 Tpr4g2357 4 24953218 24957054 PCT