Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2357 ATGGCAATTCCAGCTGAAGATAATAATTTCTTCAAACAAAAGAAATACCCTTTTATTCTAACTCTCTCTATCTTACTCATCTTTGTCACACTCTTCCTTTTCACCACAAACACCACCTCAAACCCACTTGTTTTCTACTCTAATCTCAAACACCAACCAAAATTGGTTCCCTCTGTCTCTTTACCTACAGATAATTCAACTCCAAAAGTTCAAAAAAAAATACCATCAAAGGAACAAGGGTTGCCACAAAAGGAAGAAGCTTTAAGCATTGATTGGAAGCTTTGTAAGGATCATGTGACGGTTGATTATATACCATGTTTAGATAACTATAAAGCTATTATGGCTTTGAAGTCAAGGAGACATATGGAACATAGAGAAAGACATTGTCCTGAAACTAGTCTTAATTGTTTGTTGCCTCTTCCCAAAGGGTATAAAGTTCCAGTTCATTGGCCTAAAAGTAGGGATATGATTTGGTATGATAATGTTCCTTATCCAAAGCTAGTTGAGTACAAGAAAGACCAACATTGGGTTGTGAAATCCGGTGAATATCTCAAATTTCCAGGTGGTGGTACTCAATTCAAAGACGGAGTTGATCATTATATCGAGTTCATCGAGAAGACATTACCGAAAATTCAATGGGGAAAGCATATTAGGGTTGTTCTAGATGTTGGTTGCGGTGTTGCTAGCTTTGGTGGATATTTGCTGGACAAAAATGTTATTACTATGTCATTTGCCCCGAAGGATGAACATGAAGCTCAAATACAGTTTGCTTTGGAGCGAGGAGTTCCTGCAACTCTTTCAGTCATTGGAACACAAAAGTTGACTTTTCCTGACAATGGTTTCGATCTGATCCATTGTGCACGATGCAGAGTTCACTGGGATGCAGATGGTGGTAAACCGTTATACGAACTCAATAGGGTTCTTAGACCTGGCGGTTACTTTGCATGGTCTGCAACACCAGTTTATCGTGATGATGATCGAGATCAGAAAGTATGGAAAGCCATGGTGGCTATAACAAAAGCTATGTGCTGGAAGGTTGTGGCTAAGGCCGACGATTCATCTGGAATAGGGCTTGTTATATACCAGAAGCCTACTTCATCTTCTTGCTACGAGAAACGTAAAGAGAACAATCCACCTTTATGTGAAAATGCGGATGGGAAAAATAGCTCATGGTATGCTCGACTCAATAATTGCCTTACCCCTCTTCCGGTTGATGGTAACGGTAAACTGCAGAGCTGGCCCAAGCCTTGGCCTCAGAGGCTTACCAGTAAGTCCCCTAGCTTACCTAGCGATTCAAAGGTAATTGGTGAGTTCAACAAGGATAGCAACCACTGGTCTCAACTAGTGTCAGATGTTTATGCGGATGGTCTTTCGATAAAATGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCTGCAGCTCTGATTGATCGACCGATCTGGGTGATGAATGTAGTACCGATTGATATGCCAGATACACTTTCTATTATAATGGACCGAGGATTAATAGGAATGTATCATGATTGGTGCGAGTCCTTTAGTACCTATCCTCGCACATATGACCTCATTCATGCTAGCTTTCTTTTCAAACATCTTGAGCAAAGGTGTGACCCCATAGACGCGGTTGTGGAGATAGATCGTATATTGAGACCAAATGGATATCTTGTGATTCACGATTCCATGGAAATGCTTAGTAAACTGAGTCCAATATTGCGTTCACTTCACTGGTCTGTAACGTTGCATCAAAATCAGTTTCTTGTTGGCAGGAAAAGTTTTTGGCGTCCCATGAGCTCATGA 1815 0.4077 MAIPAEDNNFFKQKKYPFILTLSILLIFVTLFLFTTNTTSNPLVFYSNLKHQPKLVPSVSLPTDNSTPKVQKKIPSKEQGLPQKEEALSIDWKLCKDHVTVDYIPCLDNYKAIMALKSRRHMEHRERHCPETSLNCLLPLPKGYKVPVHWPKSRDMIWYDNVPYPKLVEYKKDQHWVVKSGEYLKFPGGGTQFKDGVDHYIEFIEKTLPKIQWGKHIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGVPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLYELNRVLRPGGYFAWSATPVYRDDDRDQKVWKAMVAITKAMCWKVVAKADDSSGIGLVIYQKPTSSSCYEKRKENNPPLCENADGKNSSWYARLNNCLTPLPVDGNGKLQSWPKPWPQRLTSKSPSLPSDSKVIGEFNKDSNHWSQLVSDVYADGLSIKWSSVRNVMDMNAGYAGFAAALIDRPIWVMNVVPIDMPDTLSIIMDRGLIGMYHDWCESFSTYPRTYDLIHASFLFKHLEQRCDPIDAVVEIDRILRPNGYLVIHDSMEMLSKLSPILRSLHWSVTLHQNQFLVGRKSFWRPMSS* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2357 604 Gene3D Vaccinia Virus protein VP39 171 349 IPR029063 -
Tpr4g2357 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 325 IPR029063 -
Tpr4g2357 604 MobiDBLite consensus disorder prediction 60 82 - -
Tpr4g2357 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 585 IPR029063 -
Tpr4g2357 604 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 102 590 IPR004159 GO:0008168
Tpr4g2357 604 PANTHER PMT16, PUTATIVE-RELATED 6 604 - -
Tpr4g2357 604 CDD AdoMet_MTases 220 314 - -
Tpr4g2357 604 Gene3D Vaccinia Virus protein VP39 424 596 IPR029063 -
Tpr4g2357 604 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 604 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2357 Tpr-Chr4 24953218 24957054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2357 - - gmx:100800390 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2357 4 24953218 24957054 Tpr4g2357 4 24953218 24957054 ECH
Tpr7g0982 7 9131878 9135679 Tpr4g2357 4 24953218 24957054 PCT