Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0977 ATGGAAAACTCATCGAACCCTAACAATGTCAAAACCCAACGCCCCATCGAAGACGAAGACATCGACGAACAAGAAGACGAAGAGGAAGAAGAAGAAGAAGACGATCTCCCCCAATCCCCATTGGCCCGTTTACGAGAGCAGAAATTCAAGCTTGAAACCCTTTCCCGACGACTCTCATCGGAGCTAGTCCCAATCCGAGTCCACGACGTCATAATTCGCGGAAACACGATAACCAAAGATTGGGTGATTGAAGCAGAAATCAAGGGAATCGAAGATGTATCCACTATGCAGGAACTCATTCGCGCCTCTGAAATCGCACTCGCTAGGCTTCAGAATCTCGGGGTTTTTGAATCTAGTAAGCTTAGTCTTGAGCCTGGGCCGGTCGAATTGCCTAACACTGCCAATGTTGTTATTGACATTGTTGAAGCTGCTAACAAAATTTCTGGTGAATTTGGTGTTTATACCAAACCTGCGACTAGTTCTTGGACTGCTGAAGGTACTCTTAAGTACAAAAACTTGTTGGGTTATGGTGATCTATGGGATGCTTCTTTGGCTTACGGCGCCAACCAAGCAACAGAGGTGAGTCTAGGGCTATATGCTCCTCGACTTAAAGGAACTTCAAATCCCGTTGTAGCACGACTGTCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATCTCAACAAAGCACCATGATTTGGCATACACTCTTGGATGGCGTACCTTAACAGATCCATTACAAATGGCATCCAGGTCCGTAAGGAGGCAGCTTGGGCATGGTTTGCTATCATCTTTGAAGTATACATTTAAAATTGATAGGAGAAACTCACCAATTAGGCCTACAAAAGGACATGCTTTTGTTTCTACCACTCACCTTGGTGGCCTTACACCAGATAACCGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATCTTCGGTTTGCTGTCCCCTTTGGGTTTTATAATACAGCACTGAACCTAGGGATTTCTGCTGGTGCTGTTTTTCCATGGGGACAAGATTTCATGAACAGACCATCTCCCCTTCCTGAACGGTTTTATTTGGGCGGTGATTTCTCTCCAGTTTGCACCCTTGGCGGGTCAATGACATTGTGGGGATTTAGAACTAGGGGATTAGGTCCAGCTGAACCACGAAGACAAAGCAGAGATGTATTCAATGATGAAAGTAATGATCCCTCTACATGGGACTTCGTTGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCAATTAGGTGGTTAAGAGAACACGGGATCCATGGCCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCGGAGGTTCTTAGAATCCGTTCGAACATCAGTGGGATGTGGATTTGTCATTCCTACTAGACTTTTCCGCCTAGAGGCTAACTACTACTACATACTCAGGCAGAATGAACATGATCGTGGCAAAACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCATAG 1557 0.4509 MENSSNPNNVKTQRPIEDEDIDEQEDEEEEEEEDDLPQSPLARLREQKFKLETLSRRLSSELVPIRVHDVIIRGNTITKDWVIEAEIKGIEDVSTMQELIRASEIALARLQNLGVFESSKLSLEPGPVELPNTANVVIDIVEAANKISGEFGVYTKPATSSWTAEGTLKYKNLLGYGDLWDASLAYGANQATEVSLGLYAPRLKGTSNPVVARLSMLSQDWQEFSSYKEQLLGMSLGLISTKHHDLAYTLGWRTLTDPLQMASRSVRRQLGHGLLSSLKYTFKIDRRNSPIRPTKGHAFVSTTHLGGLTPDNRSLRFLRQEFDLRFAVPFGFYNTALNLGISAGAVFPWGQDFMNRPSPLPERFYLGGDFSPVCTLGGSMTLWGFRTRGLGPAEPRRQSRDVFNDESNDPSTWDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGAGNTAKLTQNEYKHFSPRRFLESVRTSVGCGFVIPTRLFRLEANYYYILRQNEHDRGKTGFRFSFSAPS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0977 518 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 14 516 - -
Tpr7g0977 518 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 14 516 IPR039910 -
Tpr7g0977 518 Coils Coil 41 61 - -
Tpr7g0977 518 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 157 516 - -
Tpr7g0977 518 MobiDBLite consensus disorder prediction 1 42 - -
Tpr7g0977 518 Gene3D membrane protein fhac 64 143 - -
Tpr7g0977 518 Pfam Surface antigen variable number repeat 65 142 IPR010827 GO:0019867
Tpr7g0977 518 Pfam Omp85 superfamily domain 172 515 IPR000184 GO:0019867
Tpr7g0977 518 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0977 Tpr-Chr7 9048574 9053244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0977 K07277 - gmx:100785408 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0977 7 9048574 9053244 Tpr7g0977 7 9048574 9053244 ECH
Tpr7g0977 7 9048574 9053244 Tpr4g2364 4 25049127 25053904 PCT