Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2364 ATGGATACTACAGAAAAATCATCTCCTTCTAAACCTAACAACAACGACAATGAAGAACAAGAAGAAGAAGAAGAAGACGAAGAATACGAAGAAATCGACGAAGAAGAAGAAGAATTGAATCAACAAATTCCCCAATCAACAGAATCAAAATTACGCAACCAACGTTTCAAAGTACAAACCCTATCTCGTCGATTATCATCAGAACTAGTTCCGATTCGAGTCCACGATGTAATAATCAACGGAAACACCAAAACAAAGGATTGGATAATCGAAGCTGAACTTGATGGAATTGAAAAAGCTACTACAATGCAAGAACTCATGCAAGCTTGTCAAATCGCTATTGCAAAACTTCAAGGTCTTGAAATCTTTGATTCGTGTAAGGTTAAACTTGAAGCTGGACCGATTGAATTGCCAGATACTGCTAATGTTATTATTGATGTTGTTGAAACGGAGAATAAGCTTTCTGGTGCATTTGGTGTTTATACCAAACCTTCTACTAATACATGGACTTCTGAAGGAACTGTTAAGTATAAGAATGTTTTTGGTTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGGCAACCAGGCAACAGAGGTTAGCTTAGGGGTGTATGCCCCTCGCGTGAAAGGATTTTTAACTCCTCTTCTGGCACGAATTTTCATGTCTTCTCAAGACTGGCAGGACTTTTCTTCATACAAAGAGAAATTGATGGGAATGTCTCTTGACTTGATATCGACAAAGCACCAGGACTTAGTATACACTCTTGGATGGCGTACCTTAACAGATCCATCACAAATGGCATCCAGGTCTACAAGGAGGCAGCTTGGCCATGGGTTACTGTCGTCTTTGAAATATACTTTTAAGTTTGATAGGAGAGATTCGCCTTTTAGGCCTACAAAAGGATATGCTTTTGTTTCTACCACTCGCCTTGGTGGTCTTACTCCGGATAACCGGAGCTTGCGGTTTCTGCGCCAGGAGTTTGATGTTCGCCTTGCTGTCCCTTTTGGATTTTATAATACAGCATTGAACCTTGGCATATCTGCTGGTGTTGTTTTTCCATGGGGGAAAGGGTTCAGGACCAAGCCATCTCCACTCCCTGAAAGGTTTTATTTGGGTGGCGAATTCTCTCCAGTTTGCACCCTAGGAGGACCAACAACATTATGGGGATTCAAAACTAGGGGAGTAGGTCCTACTGAACCACGGAGGCAAAGAAGGGATGAAGAAAATGATGGCACACATGACTTCATTGGAGGAGATCTTTCTGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCTATTAGGTGGTTGAGAGACCAAGGAATACATGCACACATTTTTGCTGGTTCTGGGAATGTTGCTAAATTAACTCAGGACGAATACAAACATTTTTCTCCTCGGAAGTTCTTGGACTCCTTTCGGTTGTCCGCCGGATGTGGAATTGTTATTCCTACTAGACTCTTCCGCCTAGAGGCTAACTACGTCCACCTGCTTAGGAGGGATGAGCATGATCGTGGGAAGACTGGATTTAGGTTCAGTTTCTCAGCTCCTTTTTAG 1563 0.421 MDTTEKSSPSKPNNNDNEEQEEEEEDEEYEEIDEEEEELNQQIPQSTESKLRNQRFKVQTLSRRLSSELVPIRVHDVIINGNTKTKDWIIEAELDGIEKATTMQELMQACQIAIAKLQGLEIFDSCKVKLEAGPIELPDTANVIIDVVETENKLSGAFGVYTKPSTNTWTSEGTVKYKNVFGYGDLWDASLAYGGNQATEVSLGVYAPRVKGFLTPLLARIFMSSQDWQDFSSYKEKLMGMSLDLISTKHQDLVYTLGWRTLTDPSQMASRSTRRQLGHGLLSSLKYTFKFDRRDSPFRPTKGYAFVSTTRLGGLTPDNRSLRFLRQEFDVRLAVPFGFYNTALNLGISAGVVFPWGKGFRTKPSPLPERFYLGGEFSPVCTLGGPTTLWGFKTRGVGPTEPRRQRRDEENDGTHDFIGGDLSVTAFADLSFDLPIRWLRDQGIHAHIFAGSGNVAKLTQDEYKHFSPRKFLDSFRLSAGCGIVIPTRLFRLEANYVHLLRRDEHDRGKTGFRFSFSAPF* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2364 520 MobiDBLite consensus disorder prediction 17 41 - -
Tpr4g2364 520 Coils Coil 15 49 - -
Tpr4g2364 520 MobiDBLite consensus disorder prediction 1 52 - -
Tpr4g2364 520 Gene3D membrane protein fhac 71 150 - -
Tpr4g2364 520 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 164 520 - -
Tpr4g2364 520 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 11 518 IPR039910 -
Tpr4g2364 520 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 11 518 - -
Tpr4g2364 520 Pfam Omp85 superfamily domain 179 518 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2364 Tpr-Chr4 25049127 25053904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2364 K07277 - gmx:100802876 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2364 4 25049127 25053904 Tpr4g2364 4 25049127 25053904 ECH
Tpr7g0977 7 9048574 9053244 Tpr4g2364 4 25049127 25053904 PCT