Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0949 ATGAAAACAAAGATCTTCAAGTTGGTAGAATTTCTGATAAAAAAAGGTAAAGTGAATAAGGAAGAACCACCTTATGATCTTAAGGAAGCTTTTACAAAGTTTACAAATGGTGAGAATCACATGTCAAAGGATCAACTACTTCAATTCATGGTGGAGTATCAAGGAGAACAAAATTGCACCTTGTTGGATTTGGAACCAATTTTTGAAAAGCTTTTGCAAAATGGAAGTTCTAGCAATGAAAGTACTAGCAATATTGCAGGACTTAGTTTGGATAAGTTCATCGATTTTCTGCTTCTTGATGATTTCAATGGTCCTTTAAAAAATGAGGTACATCATGATATGAATGCTCCCTTGTCACATTATTTCATGTATACAGGACACAATTCCTACCTAACTGGGAATCAATTAACTAGTGAGAGCAGTGATGAACCAATTATAGAGGCTTTGAAACAAGGTGTACGAGTAATTGAACTTGATTTATGGGCTTCAACTAAACATGGTGGTATTAAAGTAGTTCATGGAAGGACTCTTACCACTCCTGTTCCACTAACCAAATGTTTGGAATCCATAAAGGAACATGCTTTTGTCAAATCTGATTTTCCAGTCATTCTAACTTTGGAAGACCACTTAACACCAAAACTTCAGGCTAAATTTGCAGAAGTGGCAGTTCAAATATTTGGAGAAATGCTCTATTGTCCTCAAACAGATTTTTTGACAGAATTTCCATCACCAGCATCACTAAAAAAAATGATAGTTATATCAACTAAACCACCAAAGGAATATCCTCAACCTGATGGTGTCAGCAATCAGGTGCCAAATGGAAGTGAATCATCTGAAGATGAAACATGGGAATTGCAAGATTCTATAGTTAAACTAGACAAGGAAGATATAAATACAAGTGATTACAAATCAAACCAACAAAGTCCGCGTGAATACAGACAATTGATTACAATCCATGGTGGGAAATCAGAAGGTACTATGAAAGATAGACTCAAAGTTGATGATGGTAAAGTTAGAAGGCTAAGTTTGAGTGAGAAGAAACTCAAAACTGCTTCTGAATCTCATGGAGCTGACCTTATTAGGTTCACACAGAAAAATATCCTCAGAATTTTTCCTAAAGGAGAACGCGTAAAATCCTCAAATTTTAGGCCGCATTTAGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGTTATGGAAAATCACTCCGATTGATGCAAGGGATGTTCAAAGCAAATGGAGGATGCGGTTATGTGAAAAAACCTGAATTTCTAATTCAAGAAGGGGCAGATAGTGAGGTTTTCGATCCTAAAAGAACATTGCCGGTGAAGCAGATATTAAAAGTAAAAGTATACAAAGGTGTTGGTTGGAAGTCAGATTTCAGTCGAACACACTTCGACCGATTCTCTCCACCAGACTTTTACACAAAGGTTTGTATTGTTGGAGTTGGAGCTGATTGTACGAAGAAGAGAACAAGAGTAAAGATGGACAATTGGTATCCTGTTTGGGATGAAGAGTTTGAATTCCAGTTGACTGTTCCAGAGCTAGCGTTGCTTCGGATCGAAGTAAAGGATAAAGATCAGACAAAAGATGATTTTGCTGGACAGACTTGTTTGCCTGTATCAGAGCTGAGATGTGGATTTCGGTCTGTTCGTTTGTGTGACAGAAAGGGAAAGGAATTGAAGTCTGTCAAGCTATTACTTCGCTTCGAACTTGAAACTTTATAG 1737 0.3725 MKTKIFKLVEFLIKKGKVNKEEPPYDLKEAFTKFTNGENHMSKDQLLQFMVEYQGEQNCTLLDLEPIFEKLLQNGSSSNESTSNIAGLSLDKFIDFLLLDDFNGPLKNEVHHDMNAPLSHYFMYTGHNSYLTGNQLTSESSDEPIIEALKQGVRVIELDLWASTKHGGIKVVHGRTLTTPVPLTKCLESIKEHAFVKSDFPVILTLEDHLTPKLQAKFAEVAVQIFGEMLYCPQTDFLTEFPSPASLKKMIVISTKPPKEYPQPDGVSNQVPNGSESSEDETWELQDSIVKLDKEDINTSDYKSNQQSPREYRQLITIHGGKSEGTMKDRLKVDDGKVRRLSLSEKKLKTASESHGADLIRFTQKNILRIFPKGERVKSSNFRPHLGWMYGAQMVAFNMQGYGKSLRLMQGMFKANGGCGYVKKPEFLIQEGADSEVFDPKRTLPVKQILKVKVYKGVGWKSDFSRTHFDRFSPPDFYTKVCIVGVGADCTKKRTRVKMDNWYPVWDEEFEFQLTVPELALLRIEVKDKDQTKDDFAGQTCLPVSELRCGFRSVRLCDRKGKELKSVKLLLRFELETL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0949 578 MobiDBLite consensus disorder prediction 258 282 - -
Tpr7g0949 578 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 578 - -
Tpr7g0949 578 SMART plcx_3 112 256 IPR000909 -
Tpr7g0949 578 Pfam C2 domain 449 547 IPR000008 -
Tpr7g0949 578 SUPERFAMILY PLC-like phosphodiesterases 112 430 IPR017946 GO:0006629|GO:0008081
Tpr7g0949 578 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 449 574 IPR035892 -
Tpr7g0949 578 ProSiteProfiles C2 domain profile. 430 558 IPR000008 -
Tpr7g0949 578 SMART plcy_3 312 429 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr7g0949 578 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 341 427 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr7g0949 578 CDD C2_PLC_like 447 576 - -
Tpr7g0949 578 Gene3D Phosphatidylinositol (PI) phosphodiesterase 109 441 IPR017946 GO:0006629|GO:0008081
Tpr7g0949 578 Gene3D C2 domain 444 578 IPR035892 -
Tpr7g0949 578 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 578 IPR001192 GO:0035556
Tpr7g0949 578 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 112 256 - -
Tpr7g0949 578 SUPERFAMILY EF-hand 14 114 IPR011992 -
Tpr7g0949 578 Pfam Phosphatidylinositol-specific phospholipase C, X domain 114 256 IPR000909 -
Tpr7g0949 578 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 342 428 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr7g0949 578 Gene3D - 23 104 - -
Tpr7g0949 578 PRINTS Phospholipase C signature 117 135 IPR001192 GO:0035556
Tpr7g0949 578 PRINTS Phospholipase C signature 143 163 IPR001192 GO:0035556
Tpr7g0949 578 PRINTS Phospholipase C signature 240 257 IPR001192 GO:0035556
Tpr7g0949 578 PRINTS Phospholipase C signature 367 388 IPR001192 GO:0035556
Tpr7g0949 578 PRINTS Phospholipase C signature 388 406 IPR001192 GO:0035556
Tpr7g0949 578 PRINTS Phospholipase C signature 542 552 IPR001192 GO:0035556
Tpr7g0949 578 SMART C2_3c 449 556 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0949 Tpr-Chr7 8740047 8743623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0949 6 576 Acyl Lipid Metabolism Gene Families AT2G40116 54.090 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0949 K05857 - gmx:100803435 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0949 7 8740047 8743623 Tpr4g2385 4 25389445 25394567 ECH
Tpr7g0949 7 8740047 8743623 Tpr7g0949 7 8740047 8743623 ECH
Tpr7g0949 7 8740047 8743623 Tpr4g2385 4 25389445 25394567 PCT