Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2385 ATGGCTACATTCACCTACAATTACACAATGTTCAAATACTTCAACAGAAAATTCGCTATCTCCGAACAAGCACCCCCGTCCGATGTCAAGGAAGTTTTTTCCAATTTCTCCGAAGGCGGATCTACCATATCTGCCGATCAACTTCGACGATTTTTGCTTGAACATCAATGCGAACCAGATTGCACTGAAGAGGATTCAAAACGGATCATTGAAAATGCTCTGCAATCGCGGAAACGAGATCAGGAAAGCGGTGGTGATGATGATGGTGACGGAATTTCAGATTCCGGAGAGGGACTTACGGTTGATGAATTTTTCCAGTTTTTGTTGTTTGATGAATTCAATGGTCCCTTGATAACACAGGTACACCATGACATGAATGCCCCGTTATCACATTATTTCATATATACAGGACACAATTCCTATCTAACTGGAAATCAACTGAGTAGTGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGCGTCCGAGTAATTGAATTAGATGTATGGCCAAATTCAGCTAAAGATGACATCGTCGTAGTTCATGGAAGAACGCTTACAACTCCCGTCTCACTAGTCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTCGTTAAATCTCGTTACCCTGTCATTATAACTTTAGAAGATCATCTTACACAAGATCTTCAAGCTAAAGTTGCAGAGATGACAACTCAAATATTTGGAGACATGCTCTATTTTCCTCAGACAGATCCTTTGACAGAGTTTCCTTCACCAGAATCACTAAAAGATCGAATTCTTATATCAACCAAACCACCGAAAGAATATCTCGATTCCAAACAATTTAAGGATACTAGTGACAGTGAAAGGGAAATGAGTGAAGATGGAACATCACCAGCCCGTAGTATTGAAGCTGAAGACAAATGCAGTGAAAGTGACCTTGATGAGGAAGGTTTGAATCCTCGTGATAAAAAACCAGACCAGCAGAGTGCACCTCAGTACAAACGTTTGATTACAATCCATGCTGGTAAACCCAAAGGAAATGTAAGGGATCACCTTAAAATTGCTGGTGATGTTAAGCGCTTGAGCTTGAGTGAGCAGGAACTTGAAAGGGCTTCTGCCTCTTATGGAGCTGATATTGTTAGGTTTACGCAGAAGCATATTATTAGGGTGTATCCAAAGGGAACACGTGTCACCTCCTCAAATTACAGGCCCCATATAGGGTGGATGTATGGAGCTCAGATGGTCGCATTTAACATGCAGGGGCATGGAAAATCACTTTGGTATATGCAAGGGATGTTTAGAGCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGATTTTCTTATGGAAAAAGGTTCAAACAGTGAGTGTTTTGATCCTAAAAGAACACTGCCTGCGAAAACGACATTGAAGGTTAAATTATATATGGGAAATGGGTGGAGCTCAGATTTTAGCAAAACACACTTTGATACATTCTCTCCTCCAGACTTTTACACAAAGGTTTGTATTGTTGGAGTACCAGCTGATAAAGCCATTAAGAAGACCAGGGTAATTTATGATGATTGGTTTCCAGTTTGGGATGAAGAGTTTGAATTTCCTTTAAGTGTTCCAGAGCTTGCTTTGCTTAGGATAGAAGTTAGAGAGTATGATAAGCATGAAAAGGATGATTTTGGCGGACAAACATGTTTGCCAATTCCTGACCTGAAATCTGGATTCAGAACAATCCCTCTAAATGATGAGAAGGGTGAGCAATTAAAATCTGTAAAGCTTCTAATGCGGTTTCAGTTTACATGA 1785 0.4028 MATFTYNYTMFKYFNRKFAISEQAPPSDVKEVFSNFSEGGSTISADQLRRFLLEHQCEPDCTEEDSKRIIENALQSRKRDQESGGDDDGDGISDSGEGLTVDEFFQFLLFDEFNGPLITQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDVWPNSAKDDIVVVHGRTLTTPVSLVQCLKSIKEYAFVKSRYPVIITLEDHLTQDLQAKVAEMTTQIFGDMLYFPQTDPLTEFPSPESLKDRILISTKPPKEYLDSKQFKDTSDSEREMSEDGTSPARSIEAEDKCSESDLDEEGLNPRDKKPDQQSAPQYKRLITIHAGKPKGNVRDHLKIAGDVKRLSLSEQELERASASYGADIVRFTQKHIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPDFLMEKGSNSECFDPKRTLPAKTTLKVKLYMGNGWSSDFSKTHFDTFSPPDFYTKVCIVGVPADKAIKKTRVIYDDWFPVWDEEFEFPLSVPELALLRIEVREYDKHEKDDFGGQTCLPIPDLKSGFRTIPLNDEKGEQLKSVKLLMRFQFT* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2385 594 SMART plcx_3 123 267 IPR000909 -
Tpr4g2385 594 SUPERFAMILY EF-hand 10 125 IPR011992 -
Tpr4g2385 594 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Tpr4g2385 594 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Tpr4g2385 594 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Tpr4g2385 594 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Tpr4g2385 594 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Tpr4g2385 594 PRINTS Phospholipase C signature 560 570 IPR001192 GO:0035556
Tpr4g2385 594 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 457 IPR017946 GO:0006629|GO:0008081
Tpr4g2385 594 SMART C2_3c 466 574 IPR000008 -
Tpr4g2385 594 CDD PI-PLCc_plant 122 433 - -
Tpr4g2385 594 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 7 593 IPR001192 GO:0035556
Tpr4g2385 594 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Tpr4g2385 594 SUPERFAMILY PLC-like phosphodiesterases 123 447 IPR017946 GO:0006629|GO:0008081
Tpr4g2385 594 MobiDBLite consensus disorder prediction 273 329 - -
Tpr4g2385 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
Tpr4g2385 594 ProSiteProfiles C2 domain profile. 447 576 IPR000008 -
Tpr4g2385 594 MobiDBLite consensus disorder prediction 273 326 - -
Tpr4g2385 594 Gene3D C2 domain 462 594 IPR035892 -
Tpr4g2385 594 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2385 594 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 7 593 - -
Tpr4g2385 594 SMART plcy_3 330 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2385 594 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 72 IPR015359 -
Tpr4g2385 594 CDD C2_PLC_like 464 594 - -
Tpr4g2385 594 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 466 593 IPR035892 -
Tpr4g2385 594 Pfam C2 domain 471 568 IPR000008 -
Tpr4g2385 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2385 594 Gene3D - 23 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2385 Tpr-Chr4 25389445 25394567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2385 5 593 Acyl Lipid Metabolism Gene Families AT2G40116 58.699 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2385 K05857 - gmx:100777010 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0949 7 8740047 8743623 Tpr4g2385 4 25389445 25394567 ECH
Tpr4g2385 4 25389445 25394567 Tpr4g2385 4 25389445 25394567 ECH
Tpr7g0949 7 8740047 8743623 Tpr4g2385 4 25389445 25394567 PCT