Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0885 ATGGATACTTTATCACAAAATTCTCAAAAAAAAATTGATGGGTCTCTTTCTAGTTTCACTGATTCAAGTGTTGAGTCTAGAACAACTAGTTTTAATGGATCTAATTCTAGCTCATCAATTTCTACTTCAGAAGAAGCTAAATCAAATGGGTTTTCTTCTAATACTCCTCTTGGTTGGCCTATTCTTAAAGCCACACTTTCCAATTCAAAGCGTTTAAATTCTGATGAGAAAGAAAATAAGCACAAATCTAAATTGGAACACTCAAAATTTACCACCATTGATTTAAAAATCTCAGATGTTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATTTCTAATGCCATTACTAATCTATGTGCTACTGCATTTGGGCAACTATGGAGACTAGAACCACTACCATGTGAGAAGAAAGAAATGTGGCAGAGAGAAATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCGGATGGAAAGAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTGTATCAACCTTCCAGCACTTCGCAAACTTGATAACATGTTACTAGAAATATTAGACAGTTTCACGGCTACCGAATTTTGGTATGTTGATCAAGGAATTGTAGCTGCTGATGCAGATGGTTCGGGCTCTTTTCGCAAGTCTATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCCGTACCCCGTGTTCCCCCTGAAGGTCTCAGTGAGAACTCTAGAAAGAATTTGAATCACTCAAGAGAAAGTGCTAGTCAAATTCTCAAAGCAGCTATGTCTATCAACAGCATTGTTTTGGCCGAAATGGAAGTTCCCGAGTCATATTTGGAAACACTCCCTAAGAATGGAAGAACTTGCTTAGGAGATTTTATTTACCGATACATCACATCCGATCAATTCTCCTCAGAGTGCCTGCTTGATTGCTTAGACCTATCTTCTGAACATACTGCACTTGAGATTGCAAACCGTTTAGAAGCTGCAATTTATGTATGGCGTCGAAGATCTCACCACAAATCATCCCCTAGTCCCAACCGTTCAACTACAAAGTCATCATGGGGGATAGTCAAGGATTTCATGCTTGATGGAGATAAGAGAGAACTGCTAGCTAATAGAGCTGAAAACATTCTAAATTCATTGAAGCATCGGTTTCCGGGATTAACACAAACTACCTTGGATACCTGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTCTCGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTTCAACATTGTGTCACGCATCGATGATTTGTCATACGTTGATGACTTGACAAAACATTCAGATAAATTTGCATTGGTTCCTCATACAACAGTTAATATAGTTTCTCAGCAAAAGATTTCGCGTCCATTTTCAGTGTCCGTCTCAGGCACTCCACACAAAGCAGCATTTGGCACACCTAAGTTTTCGCCTGTGCCATTGATCAGTCCTGTAAGAGGGGAGAGAACTCCTTTCCTCCACAACAATAACAACAACAATGTCAACAACATAAAACCTCAGCGTCGCGGCTTTGGGGTGAGAAGAGCATTGTCAAATTATCTTGGTGTTGAGACTAAAACAAAGACATGTACCAATTCAACTGAGGTTAATTGTTCAAACCCAGGTAGCAAGAAAACAGAACAACCAGAACAACAATGTCAGAAGGAAACATGTGCTGCGAAAAACAAGACAAAATAA 1797 0.3962 MDTLSQNSQKKIDGSLSSFTDSSVESRTTSFNGSNSSSSISTSEEAKSNGFSSNTPLGWPILKATLSNSKRLNSDEKENKHKSKLEHSKFTTIDLKISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWQREMEWLLSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAADADGSGSFRKSIQRQEEKWWLPVPRVPPEGLSENSRKNLNHSRESASQILKAAMSINSIVLAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHTALEIANRLEAAIYVWRRRSHHKSSPSPNRSTTKSSWGIVKDFMLDGDKRELLANRAENILNSLKHRFPGLTQTTLDTCKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLSYVDDLTKHSDKFALVPHTTVNIVSQQKISRPFSVSVSGTPHKAAFGTPKFSPVPLISPVRGERTPFLHNNNNNNVNNIKPQRRGFGVRRALSNYLGVETKTKTCTNSTEVNCSNPGSKKTEQPEQQCQKETCAAKNKTK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0885 598 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 17 570 IPR038937 GO:0005085
Tpr7g0885 598 MobiDBLite consensus disorder prediction 1 52 - -
Tpr7g0885 598 MobiDBLite consensus disorder prediction 572 592 - -
Tpr7g0885 598 MobiDBLite consensus disorder prediction 572 598 - -
Tpr7g0885 598 ProSiteProfiles PRONE domain profile. 90 472 IPR005512 GO:0005085
Tpr7g0885 598 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 98 466 IPR005512 GO:0005085
Tpr7g0885 598 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 17 570 - -
Tpr7g0885 598 Gene3D PRONE domain, subdomain 1 332 472 - -
Tpr7g0885 598 Gene3D PRONE domain, subdomain 1 92 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0885 Tpr-Chr7 7829584 7833045 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0885 - - gmx:100796692 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0885 7 7829584 7833045 Tpr4g3237 4 38443574 38447723 ECH
Tpr7g0885 7 7829584 7833045 Tpr7g0885 7 7829584 7833045 ECH
Tpr7g0885 7 7829584 7833045 Tpr4g3237 4 38443574 38447723 PCT