Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3237 ATGGAAACTTTATGCAACAAGAGTGAAAATTTTCAAAAGAAAAAAAATGGGTCTTGTACTTCTACTGGTTCATGTTCTTCAGATTTAACTGAACAAGCAAAAAAAGTTAATGGGTGTTCATCTTCTCTTCCTATTAAGAAGGCTATTGTCTCTAAATGCAGCAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCAAGTAGAAGATAAAAAAGTACTTACTAGTAGTATCTGTTCAAAAATTTCTGGATCATCAGGAGTTGATATGATGAAGGAGAGGTTTGCAAAATTGCTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGAGTTAGCACTGCTATGGCCATCTCAAATGCTATTACTAATTTGTGTGGGACTGTATTTGGGCAATTATGGAGACTAGAACCTGTACCTTGTGAAAAGAAAGAAAAGTGGCAAAGAGAAATGGATTGGCTTCTTTGTGTTGGTGATCATATTGTTGAGTTAATGCCTTCTTGGCAAACATTTCCAGATGGTAGTAAGCTAGAGGTAATGACTTGCAGACCAAGATCAGATATTTTTATCAATCTTCCAGCTCTGCGTAAACTCGACAACATGCTTCTTGAAATATTAGATAGTTGCACATCTATGGAGTTTTGGTATGTTGACCAAGGAATTGTGGCACCAGATGCAGAAGGATCAGCCTCTTTTCGGAAAAGAAATCAGCGACAAGAGGAGAAATGGTGGCTCCCCGTACCTCGTGTTCCCCCTACTGGTCTCAGTGAGAGTTCAAGAAAGAAGTTGACTCACACACGCGAATGCGCTAGCCAAATACTAAAAGCAGCTATGTCTATAAACAGCATTGCTTTAGGGGATATGGAAGTTCCAGAGTCGTATTTGGAATCACTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTATCTATCGATACATCACATCAGACCAATTCTCTCAGGAATGCTTGCTTGACTGCATAGACCTTTCCAATGAACATGTTGCACTAGAGATCGCTAACCGTTTGGAAGCTGCAATTTATGTATGGCGCCGAAAATCTCACTCTAGACCTCCACTTTATCCTATCCGTTCAACTACTAAGTCATCGTGGGAGATTGTGAAAGACTTTATGGTTGATGGAGATAAGAGAGATTTGCTTGCAGAGAGAGCTGAAAGTATTCTACTTTCACTTAAGCAACGTTTCCCGGGTTTAAGTCAAACTACATTGGATACCAGCAAGATCCAGTACAACAAGGATGTTGGCAAATCAATCCTAGAAAGCTATTCAAGAGTTTTGGAGAGTATGGCATTTAACATAGTAGCTCGTATCGATGATTTACTATATGTTGATGACATAACCAAACATTCAGATAGGTTTCCATTAGCTCCAATGGTTAACATGGTTTCACAAAAGAAAGTTTCACAACAATCACTAGTGTCTGTCTCAGACACTCAACACAACAAAACAACATTTGGTACACCAAGTTGTTCACCTGTTGTGCCACTAATTAGTCCTACAAAGGCTGAGATAACTCCTTTTATTCGCGATATGATTAAACCTCAACGCCGCGGTTTCGGTGTGAAGAGAGTGTTGTCAAATTATCTTGGAGGAGATATGAAAGCAACAAAGGTATTTAGTAACTTAGCTCATGAGTTGAATGGTTCAAATGCAAGTTGCAATCAAGAATCATGTGCCATGAAGAGCAAGACAAAATGA 1713 0.39 METLCNKSENFQKKKNGSCTSTGSCSSDLTEQAKKVNGCSSSLPIKKAIVSKCSKSDEKENEPVSQVEDKKVLTSSICSKISGSSGVDMMKERFAKLLLGEDMSGSGKGVSTAMAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWLLCVGDHIVELMPSWQTFPDGSKLEVMTCRPRSDIFINLPALRKLDNMLLEILDSCTSMEFWYVDQGIVAPDAEGSASFRKRNQRQEEKWWLPVPRVPPTGLSESSRKKLTHTRECASQILKAAMSINSIALGDMEVPESYLESLPKNGRTCLGDFIYRYITSDQFSQECLLDCIDLSNEHVALEIANRLEAAIYVWRRKSHSRPPLYPIRSTTKSSWEIVKDFMVDGDKRDLLAERAESILLSLKQRFPGLSQTTLDTSKIQYNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDITKHSDRFPLAPMVNMVSQKKVSQQSLVSVSDTQHNKTTFGTPSCSPVVPLISPTKAEITPFIRDMIKPQRRGFGVKRVLSNYLGGDMKATKVFSNLAHELNGSNASCNQESCAMKSKTK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3237 570 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 453 IPR005512 GO:0005085
Tpr4g3237 570 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 9 546 - -
Tpr4g3237 570 Gene3D PRONE domain, subdomain 1 321 458 - -
Tpr4g3237 570 Gene3D PRONE domain, subdomain 1 79 320 - -
Tpr4g3237 570 MobiDBLite consensus disorder prediction 1 25 - -
Tpr4g3237 570 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 9 546 IPR038937 GO:0005085
Tpr4g3237 570 ProSiteProfiles PRONE domain profile. 77 459 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3237 Tpr-Chr4 38443574 38447723 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3237 - - vun:114193182 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0885 7 7829584 7833045 Tpr4g3237 4 38443574 38447723 ECH
Tpr4g3237 4 38443574 38447723 Tpr4g3237 4 38443574 38447723 ECH
Tpr7g0885 7 7829584 7833045 Tpr4g3237 4 38443574 38447723 PCT