Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0666 ATGTCTTTATTTTCTACTCTCCGTCGATCCTCCTTCATCCGATGCTTTCGAACTTCGACCACACAATCTTCTTCCTTTACACCATCGTTACCGAATACCAACCCACCTCGATATCCAAAGTTGGTTCCGGCCGTTGTTCTTGGCTCTGTGCTTGCTCTTTTGTATTACGTCTCCAAAAATAATTCACACTTCGACTCCGCTTTCTTAAACAATGCTCTTAGAAAACTATCCCTTAGTGAGAGTACCAATAATAACTTACTTTTTGGAGATGCGTATAGAAGTAAGGTTTTCTTCAACTATGAGAACCGCATACGGTTGCATAGTCCACCTGAAAAGGTTTTTGAATACTTTGCATCTTGTCGTACACCAGAACCTCTTATGACTCCGGCAGATTTAATGCGCGCAGTAGTTCCTGTTTTCCCTCCATCAGAATCAAACCTTGTTAGAGAAGGACACTTGAAAGGAGAAAGAAGTCCTGGCCACTTGTTTTGTCCTCCTTCAGATTTTTTTATGCTTTTCGATGTAAATGGCGACGGCCTTATATCTTTCAGAGAGTATTTATTCTTGGTAACACTGCTTAGCATCCCAGAATCAAGTTTTTCTGCAGTGTTTAAAATGTTTGACATGGATAATGATGGGCACGGTGTTCACCGAAGGGATGAACGACTGACAGATGCTTCAATAGAAGATGGAAGGATGGTGGAATACTTATTTGGTAAAGACGGAAAAGGACGGCTCAAACATGATAAATTTGTGAAGTTTATAAGTGATTTGCATGATGAAATTTTGAGGCTGGAGTTTGTTCATTATGACTTCAAATCTCAAAAAACCATATCAGCCAAGGATTTTGCACACTCCATAGTCGCTTCTGCAGATGTGAGTCATCTGAACAAGTTACTCGAAAGGGTTGATGAAATGAACGATGATGCACGGTTCAATAACATAGGCATCACATTTGAGGAGTTCAAGAATTTTGCCGAACTGCGGAAAAAATTAGTACCACTTTCATTGGCTCTTTTCAGTTTTGCAAAAGTAAATGGCCTTCTAACAAGAGATGATTTTCAACGAGCTGCGTCAAGTGTTTGTGGTTTATCTCTCTCTAACAATGTGGTGGAGATTGTTTTCCATTTGTTTGACACAAATGGGGATGGAAATCTTTGTTCAAATGAATTTGTTAGAGTGCTACATAGGCGAGAGAGAGATGTTGGTCGAACTGTGGAGACAGGAATCATTGGTTTCTTGTCATGCTGCTGGAGCTGTACAGACACATCTCCATATTCACAGTTGTTTTCCTGA 1296 0.402 MSLFSTLRRSSFIRCFRTSTTQSSSFTPSLPNTNPPRYPKLVPAVVLGSVLALLYYVSKNNSHFDSAFLNNALRKLSLSESTNNNLLFGDAYRSKVFFNYENRIRLHSPPEKVFEYFASCRTPEPLMTPADLMRAVVPVFPPSESNLVREGHLKGERSPGHLFCPPSDFFMLFDVNGDGLISFREYLFLVTLLSIPESSFSAVFKMFDMDNDGHGVHRRDERLTDASIEDGRMVEYLFGKDGKGRLKHDKFVKFISDLHDEILRLEFVHYDFKSQKTISAKDFAHSIVASADVSHLNKLLERVDEMNDDARFNNIGITFEEFKNFAELRKKLVPLSLALFSFAKVNGLLTRDDFQRAASSVCGLSLSNNVVEIVFHLFDTNGDGNLCSNEFVRVLHRRERDVGRTVETGIIGFLSCCWSCTDTSPYSQLFS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0666 431 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Tpr7g0666 431 ProSitePatterns EF-hand calcium-binding domain. 174 186 IPR018247 -
Tpr7g0666 431 Gene3D - 108 215 - -
Tpr7g0666 431 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 431 - -
Tpr7g0666 431 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Tpr7g0666 431 ProSiteProfiles EF-hand calcium-binding domain profile. 168 196 IPR002048 GO:0005509
Tpr7g0666 431 SUPERFAMILY EF-hand 169 285 IPR011992 -
Tpr7g0666 431 Gene3D - 344 407 - -
Tpr7g0666 431 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 431 IPR039800 GO:0005509|GO:0006851
Tpr7g0666 431 Pfam EF-hand domain pair 347 397 IPR002048 GO:0005509
Tpr7g0666 431 SMART efh_1 370 398 IPR002048 GO:0005509
Tpr7g0666 431 SMART efh_1 165 193 IPR002048 GO:0005509
Tpr7g0666 431 Gene3D - 221 334 - -
Tpr7g0666 431 Pfam EF hand 168 186 IPR002048 GO:0005509
Tpr7g0666 431 SUPERFAMILY EF-hand 263 397 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0666 Tpr-Chr7 5867191 5869584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0666 75 368 EF-hand Containing Proteins AT4G32060 59.248 1.18e-123 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0666 K22827 - gmx:100786375 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3418 1 38466995 38473112 Tpr7g0666 7 5867191 5869584 PCT