Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0657 ATGGCTTCCAACAACAAATTCTCTGCCATCATTTTTTTGCTTTCTCTTCTTGCTTACTCAACATTCACTCATGCTAATGTTCCATGCCCACCATCACCAAAACCAACACCTTCACCTAGTGCTTCTCCACCATCCAAAGGTCAGTGCCCCAAGGATACCTTAAAGCTAGGGGTTTGTGCCGATCTTTTAGGGTTGGTTAATGTTGTTATTGGAAATCCTCCTTCCGGTAGCAATTGTTGTGCATTGATCAAGGGTCTGGCGGATTTGGAGGCCGCGCTCTGTCTTTGCACCGCACTTAAGGCCAATGTGCTTGGAATTAACTTGAATGTACCTATCACGCTAAGTTTGATCCTTAGTGCATGTCAAAAAACCATTCCTTCTGGTTTCCAATGTCCCTAA 399 0.4436 MASNNKFSAIIFLLSLLAYSTFTHANVPCPPSPKPTPSPSASPPSKGQCPKDTLKLGVCADLLGLVNVVIGNPPSGSNCCALIKGLADLEAALCLCTALKANVLGINLNVPITLSLILSACQKTIPSGFQCP* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0657 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Tpr7g0657 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 132 IPR036312 -
Tpr7g0657 132 Gene3D - 48 132 IPR036312 -
Tpr7g0657 132 PANTHER - 28 132 - -
Tpr7g0657 132 CDD HPS_like 47 131 IPR027923 -
Tpr7g0657 132 PANTHER LIPID TRANSFER PROTEIN 28 132 - -
Tpr7g0657 132 SMART aai_6 49 131 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0657 Tpr-Chr7 5784084 5785146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0657 47 132 Acyl Lipid Metabolism Gene Families AT4G22490 37.209 5.59e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0657 - - mtr:MTR_3g106750 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3406 1 38379752 38380652 Tpr7g0657 7 5784084 5785146 PCT