Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0652 ATGTGGCGGGTGACCGGTGAAAACCGTTATAAAAATTTGAGCCGTTCGCGTAACCGCCATCAACGTCTACTCAACAAACCATATACACCTCTTTCAGAATCTCGAGAATTCAGATCGAAGTTCCATTTTCAGAATGAGTTTCTTTTTCTTCTTCTTCTTCTTCACTTGACTCAAAATCGAGAACGCTACAGTGAAATCATGAGTGAGATGATTGTATCTAAAGAAAGTCCTCGGCGATCGCTGAGCATTCAACTTTCTTCATTGATGATCGTCGATGCCGGATTATCATCCTACGATAAACTTCCTTCGCAAACTCTCACACTCTCCATCCTCAAATTGGATTCATCTTCCTTCCAGGTTGAAGTTGCAAAAACAGCAACTGTTGCAGTGCTTAAGAAAGCGGTGGAAGCGGCTTTTAGTCACGTACCGCTGGACGGACCGGAGAAAATATCATGGCCACTTGTTTGGGGTCAATTTTGTTTATGCTATGGAGAACAAAAGTTAGTTACAGAAACGGATTATCTTAGAGATTATGGTATCAAGGATGGTGATCAGCTTCGTTTCGTTCACCATGTCTCTAACATCTATAATTTTCAAAGAAAACCATCGAAGAAAAGGATTGTCAATTCGAAACATGGGAGGTCATCGTCACAAGTGAATAATAGGTGTCAACAGAAAGAATTTAGTGATGAAGACAACATTGATTTAGAGAATATAGTCATAGAGAATGGGAAGGTCCAGAATTGCAGTGCAGAAGAAAATCGCCTTGGAGTAAGCAGCAGGTTAACTGGATATTTGGGAGGGATGTTCTCAGAGGCCCGGATGGCAGTTGTGAGAAGAGCTAGAATGGAAGGCGGAATTTCCAGAGGTATAGCGAGCAGTTTAAAGAAGGTTAAAGGGATTGTAGGAAATTGCAGAAAGCCGCATCAAAGACACGCATGGAAAGAAGAGTTTTCATCGTGA 963 0.4164 MWRVTGENRYKNLSRSRNRHQRLLNKPYTPLSESREFRSKFHFQNEFLFLLLLLHLTQNRERYSEIMSEMIVSKESPRRSLSIQLSSLMIVDAGLSSYDKLPSQTLTLSILKLDSSSFQVEVAKTATVAVLKKAVEAAFSHVPLDGPEKISWPLVWGQFCLCYGEQKLVTETDYLRDYGIKDGDQLRFVHHVSNIYNFQRKPSKKRIVNSKHGRSSSQVNNRCQQKEFSDEDNIDLENIVIENGKVQNCSAEENRLGVSSRLTGYLGGMFSEARMAVVRRARMEGGISRGIASSLKKVKGIVGNCRKPHQRHAWKEEFSS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0652 320 Gene3D - 101 198 - -
Tpr7g0652 320 SUPERFAMILY Ubiquitin-like 101 193 IPR029071 -
Tpr7g0652 320 Pfam Ubiquitin-like domain 106 192 IPR040610 -
Tpr7g0652 320 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 71 312 IPR039690 GO:0000398|GO:0005689
Tpr7g0652 320 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 71 312 - -
Tpr7g0652 320 CDD Ubl_SNRNP25 106 191 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0652 Tpr-Chr7 5741479 5744312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0652 - - mtr:MTR_3g106830 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0652 7 5741479 5744312 Tpr7g0652 7 5741479 5744312 ECH
Tpr7g0652 7 5741479 5744312 Tpr1g3401 1 38339171 38341928 ECH