Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0640 ATGGATCCGACTGATTTTTCACTTCAAGATGGATTTCAAGTAGTAAACCAAAATGGTGTACATCAACAACAACAACCACTATTTGATTCTGAAAAGGATGCTGTTCATTCTTTAGTGTCCAATGGAAATTTTGATGATAGTTTGTCTATGGAAGAAATTAAAGAAGGATCCAACGCTAAAATAGAGGGAAACAATGTTAATGTTTCTAAGGAAGAGGAAGTGGGAATTGTAGTTGAAACGGATAAATCTAGAACACGAAAGGGTGTTGTTAAGAATAAGAATGTGAAACTGCCAAGTCCTAAAGGTGTTCATACAAGTTCGGTAAGAAATAACAAAGACGGGAAAGATAAAGAGGCGACAGCAGCAGCAGCAGCAGCAGCAGCATCTGTTTCAAATGGTACTTCCACTTTAGACTCTCATCTTAGACAGCCGATTAAGAACAAAGCAGTTAATGACAAGCAGACTCGGTTGTCCAAGCATCCTGGAAAGTCTGATGCAGCATCTTCTGAAGCACCAACGGAGAAGACTAGACCGCGATTAGTAAAGAAAGAACCCCTTGATAATATTCCAGGAAAAGCTGAATCATCTTCTCCTACATCAGAAGATGCCAAACCTCGTAGAGTGGGGACAATGCCAACTTATGGATTCAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTCGAAGAAAGGATTCATGCAAAGGAAGTTGAGGAGAGCAACCTGCAAGCAAAAACCAAGGAGAGCCAAGAAGCTGAGATTAAGAGGCTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTTCTAGGGTGGAGTTGAAGAAGATACCAACGACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACATCTTCAGAGCCAGAAGGACGCAGCGACAGCAGTGTTCTACAATGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGAATAACACCATTAAAGGAATTAGTCCTGTTCATTCAAAGAAGCCGCAACGAAGATCTCTCCCTCCTCGACTGACTCCTGAAAAGATCAGTTCGTCCAATTCAGCAACTGCACGGACTTCGTCTAAGGCGGTGAATAATGAGAAAACCTCCGTATCTAGTGTAACAACTGAAGTTACCACCTTGTCTATTGCAACAAGGGAAGAGAAAGCTGAAGCTATTGAGGAGAACAATGCCTTGTCTGATGAGACAAGTGAAACTCCGTCTCTGAACATAGATTCAGGTGAAGTAGAATCCCATGTGAATGGTGATATAGTCATTGAAGACAAACCACGGCGCACCTTGGTACAAGAACCTATAGCAGCAGAGTATTAA 1371 0.4179 MDPTDFSLQDGFQVVNQNGVHQQQQPLFDSEKDAVHSLVSNGNFDDSLSMEEIKEGSNAKIEGNNVNVSKEEEVGIVVETDKSRTRKGVVKNKNVKLPSPKGVHTSSVRNNKDGKDKEATAAAAAAAASVSNGTSTLDSHLRQPIKNKAVNDKQTRLSKHPGKSDAASSEAPTEKTRPRLVKKEPLDNIPGKAESSSPTSEDAKPRRVGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNLQAKTKESQEAEIKRLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRKKSSTSSEPEGRSDSSVLQCRLSLDEKVSQNNTIKGISPVHSKKPQRRSLPPRLTPEKISSSNSATARTSSKAVNNEKTSVSSVTTEVTTLSIATREEKAEAIEENNALSDETSETPSLNIDSGEVESHVNGDIVIEDKPRRTLVQEPIAAEY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0640 456 MobiDBLite consensus disorder prediction 312 342 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 235 437 - -
Tpr7g0640 456 Coils Coil 231 261 - -
Tpr7g0640 456 PANTHER PROTEIN WVD2-LIKE 4 1 446 IPR044833 GO:0008017
Tpr7g0640 456 MobiDBLite consensus disorder prediction 358 396 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 83 212 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 145 160 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 235 266 - -
Tpr7g0640 456 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 446 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 410 428 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 170 189 - -
Tpr7g0640 456 MobiDBLite consensus disorder prediction 127 142 - -
Tpr7g0640 456 Pfam Targeting protein for Xklp2 (TPX2) domain 216 286 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0640 Tpr-Chr7 5659775 5664556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0640 - - gsj:114408962 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0640 7 5659775 5664556 Tpr7g0640 7 5659775 5664556 ECH
Tpr1g3398 1 38315553 38320589 Tpr7g0640 7 5659775 5664556 PCT