Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0627 ATGGGTAGGAACAAAAACCAAATTTTTGATGACAAAACAGATGGGTTTTTCTCAGTTTCAGATTTGGGGTCTCAATCTCACCATGAAGATTACTATTATCCTGGAGGTTTGTTTGCTAGCGTTGGTCAAATGGGAATAGGCTTTGGTGTTCAGCAACCAAACCCTCCTGATTCCTCTCAAAATGGTGATGACCCTAAACTTCCTTTCAATGAATTATATGTTAAGTATATTCAATCACTATGGAAATTTGAGCCAAATGGGGTTAAGAATGTGAAGGGGGGAGGTGAAGAAGTTGTTAAGGTGAAGAATACAAATGGTGGCTTTAAACTTAAGATTAAGATAAGGAATCCTTCTATTAGGAGGTTGTGTAGTGGAGCTATTGCTGGGGCAATTTCTAGAACAACTGTGGCACCTTTGGAGACTATTAGGACTCATTTGATGGTTGGAAGTAGTGGTCATTCTACTACTGAGGTTTTTCAAGATATTATGAAAACTGATGGATGGAAGGGTTTGTTTAGGGGTAATCTTGTTAATGTCATTCGGGTTGCACCTAGCAAAGCCATTGAGCTATTTGCTTATGATACGGTAAACAAGAACCTTTCCGCAAAGCCTGGGGAGCAGTCCAAACTCCCAGTTCCTGCATCATTGATTGCAGGTGCTTGTGCTGGAGTGAGTTCAACTATATGCACGTATCCACTTGAACTACTCAAGACTAGACTAACTATCCAGAGAGGTGTTTACAATGGTCTTGTTGATGCATTCGTGAAAATAATTAAAGAAGAGGGTCCTGCAGAACTTTACAGAGGCCTGACTCCTAGTCTTATTGGAGTTATTCCATATTCGGCTACCAATTACTTTGCCTACGATACTCTACGGAAAGCATACCGAAAATTTTTTAAACAAGAGAAGATTGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCCGGTGCTATTTCAAGTACTGCAACTTTTCCACTCGAGGTGGCTCGCAAGCATATGCAAGTTGGAGCTCTTAGTGGAAGACAGGTCTACAAAAATGTGGTTCATGCACTTGTTAGCATACTCGAACAAGAAGGAATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAGTTAGTACCAGCTGCCGGAATCTCATTCATGTGTTATGAAGCATGCAAGAAGATATTGATAGATAACGACGAGGAGGAATAG 1203 0.409 MGRNKNQIFDDKTDGFFSVSDLGSQSHHEDYYYPGGLFASVGQMGIGFGVQQPNPPDSSQNGDDPKLPFNELYVKYIQSLWKFEPNGVKNVKGGGEEVVKVKNTNGGFKLKIKIRNPSIRRLCSGAIAGAISRTTVAPLETIRTHLMVGSSGHSTTEVFQDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLPVPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLVDAFVKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKFFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVVHALVSILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDNDEEE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0627 400 Pfam Mitochondrial carrier protein 304 396 IPR018108 -
Tpr7g0627 400 Pfam Mitochondrial carrier protein 209 297 IPR018108 -
Tpr7g0627 400 Pfam Mitochondrial carrier protein 118 201 IPR018108 -
Tpr7g0627 400 SUPERFAMILY Mitochondrial carrier 117 388 IPR023395 -
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 121 134 IPR002067 GO:0055085
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 134 148 IPR002067 GO:0055085
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 174 194 IPR002067 GO:0055085
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 225 243 IPR002067 GO:0055085
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Tpr7g0627 400 PRINTS Mitochondrial carrier protein signature 313 335 IPR002067 GO:0055085
Tpr7g0627 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 199 IPR018108 -
Tpr7g0627 400 PANTHER SOLUTE CARRIER FAMILY 25 26 399 - -
Tpr7g0627 400 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 399 - -
Tpr7g0627 400 Gene3D Mitochondrial carrier domain 113 398 IPR023395 -
Tpr7g0627 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 304 392 IPR018108 -
Tpr7g0627 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 294 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0627 Tpr-Chr7 5543109 5547484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0627 1 399 Organic Solute Cotransporters AT4G32400 66.085 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0627 K14684 - qsu:111999876 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0627 7 5543109 5547484 Tpr7g0627 7 5543109 5547484 ECH
Tpr1g3386 1 38226806 38230215 Tpr7g0627 7 5543109 5547484 PCT