Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3386 ATGGGTTGGAAACAAATCACCAAAAAAAATCTCTTTGATGATAAAAAAGATGGTTTTTTCTCAATCTCCAATTTAGGTTCTCAATGGGGTCATCATCATGAAGAAGAACAGGTGTACCCTATTGGTGGTTTATTTGCAAGCATGAGTCAAAATTCAATGGGAATGGGTTTTGGTAGTGGAATTCCACAACCAAACTCATCTGATTCTTCATCTTCTAAAAGAAACAATGGGGTGAAGATTCCTTGCACTGAGTTGTACATTAGGTATGTACAATCAGAAGGGAAAGTTAAGATTCATGATGGTGTTCCTGATGAAGATGAGGAAGATGAAATAGTGGAAGGTGTTAAGAGAAAGAAAAAGGGTAGTCTTAAAAAGTTGAAGATTAAGGTAAAAAACCCTTCTTTAAGGAGGTTGATTAGTGGTGCTTTTGCTGGTGCTATTTCACGTACTGCTGTTGCACCTTTGGAAACTATTAGGACTCATTTGATGGTTGGAAGTAGTGGTCATTCTACTGGTGAGGTGTTTAAGAATATCATGGAGTCTGATGGATGGAAAGGGTTGTTTAGGGGTAATTTTGTTAATGTCATAAGGGTTGCACCTAGCAAGGCTATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTCTCATCAAAGCCTGGTGAAAAGCCTAAATTCCCAGTTCCTGCATCATTGATCGCAGGTGCTTGTGCTGGAGTTAGTTCAACTATTTGCACATATCCTCTAGAATTACTCAAGACTAGATTAACCATCCAGAGAGATGTTTATAACGGTCTACTTGATGCGTTTGTAAAAATCGTTCGAGAAGAGGGTGCTTCAGAACTTTACAGAGGCCTTGCTCCTAGTCTCATTGGAGTTATTCCATATTCTGCCACCAATTACTTTGCCTATGACACTCTAAGGAAAGTGTACAAGAATGTTTTTAAGCAAGAGAAGATTGGAAACATTGAGACCCTTTTGATAGGATCTGCGGCCGGTGCTATTTCAAGCACTGCTACTTTCCCGCTTGAAGTGGCTCGCAAGCAAATGCAAGTGGGAGCACTTAGTGGAAGAATAGTTTACAAAAATGTGATTCATGCACTTGCATGCATACTTGAGAAGGAAGGTGTCCAAGGTTTGTATAGAGGATTGGGACCAAGCTGCATGAAGTTGGTTCCAGCTGCAGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGAGGAAGATGATGATGATAATGAGGAATAG 1260 0.3976 MGWKQITKKNLFDDKKDGFFSISNLGSQWGHHHEEEQVYPIGGLFASMSQNSMGMGFGSGIPQPNSSDSSSSKRNNGVKIPCTELYIRYVQSEGKVKIHDGVPDEDEEDEIVEGVKRKKKGSLKKLKIKVKNPSLRRLISGAFAGAISRTAVAPLETIRTHLMVGSSGHSTGEVFKNIMESDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSSKPGEKPKFPVPASLIAGACAGVSSTICTYPLELLKTRLTIQRDVYNGLLDAFVKIVREEGASELYRGLAPSLIGVIPYSATNYFAYDTLRKVYKNVFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKQMQVGALSGRIVYKNVIHALACILEKEGVQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVEEDDDDNEE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3386 419 Pfam Mitochondrial carrier protein 227 313 IPR018108 -
Tpr1g3386 419 Pfam Mitochondrial carrier protein 320 411 IPR018108 -
Tpr1g3386 419 Pfam Mitochondrial carrier protein 133 217 IPR018108 -
Tpr1g3386 419 ProSiteProfiles Solute carrier (Solcar) repeat profile. 320 408 IPR018108 -
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 137 150 IPR002067 GO:0055085
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 150 164 IPR002067 GO:0055085
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 190 210 IPR002067 GO:0055085
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 241 259 IPR002067 GO:0055085
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 283 301 IPR002067 GO:0055085
Tpr1g3386 419 PRINTS Mitochondrial carrier protein signature 329 351 IPR002067 GO:0055085
Tpr1g3386 419 Gene3D Mitochondrial carrier domain 128 414 IPR023395 -
Tpr1g3386 419 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 215 IPR018108 -
Tpr1g3386 419 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 310 IPR018108 -
Tpr1g3386 419 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 39 414 - -
Tpr1g3386 419 PANTHER SOLUTE CARRIER FAMILY 25 39 414 - -
Tpr1g3386 419 SUPERFAMILY Mitochondrial carrier 133 404 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3386 Tpr-Chr1 38226806 38230215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3386 7 415 Organic Solute Cotransporters AT4G32400 61.463 7.70e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3386 K14684 - gmx:100816041 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3386 1 38226806 38230215 Tpr1g3386 1 38226806 38230215 ECH
Tpr1g3386 1 38226806 38230215 Tpr7g0627 7 5543109 5547484 PCT