Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0305 ATGGGCGAAGAGACACAACAACAACTTCAACCACAATCCCTAACCGGAACACAAATTCAACCACACCCTCCGCCACAAGACCCTTCCGAAATCACCGTCTCCGCCGTCTCCAACGTCGCCGGAGTCGAAACAATTATTCCTGTAGAGTCCGAACTTACCAATGTTCCGCCACACACCAATTCACCGGCCACAAAAATCCCTCTCCGTCCTCGTAAGATCCGGAAAGTCTCACCGGACCCGACAACCACCGATTCTCAATCGGAAACCCTAAAATCAACCAATTCAACCGCCGCTGGAAAATCTTGCGGACGGAACACCAAAACGGTTCAACCGTTACGAGCACTCGCTGCTCCGAGAATCGTAGCTAGGTCACTTTCTTGTGAAGGTGAAGTTGAGATCGCAATTCGTTACCTTCGTAACGCTGATCCACTTCTTTCCCCTCTAATCGACATTCATCAACCACCTACCTTCGATAATTTCCATTCCCCATTCCTTGCCCTAACTCGTAGCATTTTGTATCAACAACTCGCGTTTAAAGCCGGAACTTCGATCTATACGCGGTTCATTGCTCTCTGTGGTGGTGAAGCTGGTGTTGTTCCTGATACTGTTCTTGCTTTAAATGCACAGCAGCTTCGTCAAATTGGGGTTTCTGGGAGGAAGGCGAGTTATCTTCACGATTTGGCTAGGAAGTATCAGAATGGGATACTCTCTGATTCTGCCATTGTAAATATGGATGATAAGTCGCTTTTCACGATGCTTACTATGGTTAATGGGATTGGTTCTTGGTCTGTTCATATGTTTATGATTTTCTCACTTCATAGACCGGATGTTCTACCGATTAATGATCTTGGTGTTCGTAAAGGGGTTCAGATTCTTTATAATCTTGATGATTTGCCTAGACCGTCTCAGATGGAGCAATTGTGTGAGAAGTGGAGACCTTATCGTTCTGTTGCTTCTTGGTATATGTGGAGGTTTGTTGAAGCCAAGGGAACTCCTTCGACTGCTGTGGCTGTTGCTACTGGTGCTGGCTTGCAGCAACACCAGATGGAGCAGCACCAACAACAACAGCAGCAGCAGCAACATCCTTCACAACAACAGCTTATGGATCCAATGAATAGCATGTTTAATATCGGGGCTGCCTGTGCTTGGGGACAGTGA 1158 0.468 MGEETQQQLQPQSLTGTQIQPHPPPQDPSEITVSAVSNVAGVETIIPVESELTNVPPHTNSPATKIPLRPRKIRKVSPDPTTTDSQSETLKSTNSTAAGKSCGRNTKTVQPLRALAAPRIVARSLSCEGEVEIAIRYLRNADPLLSPLIDIHQPPTFDNFHSPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPDTVLALNAQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQILYNLDDLPRPSQMEQLCEKWRPYRSVASWYMWRFVEAKGTPSTAVAVATGAGLQQHQMEQHQQQQQQQQHPSQQQLMDPMNSMFNIGAACAWGQ* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0305 385 MobiDBLite consensus disorder prediction 1 30 - -
Tpr7g0305 385 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g0305 385 MobiDBLite consensus disorder prediction 79 105 - -
Tpr7g0305 385 PANTHER BNAC05G15000D PROTEIN 1 379 - -
Tpr7g0305 385 MobiDBLite consensus disorder prediction 346 366 - -
Tpr7g0305 385 CDD ENDO3c 164 325 IPR003265 GO:0006284
Tpr7g0305 385 Gene3D Hypothetical protein; domain 2 161 274 - -
Tpr7g0305 385 SMART endo3end 172 327 IPR003265 GO:0006284
Tpr7g0305 385 Pfam HhH-GPD superfamily base excision DNA repair protein 169 312 IPR003265 GO:0006284
Tpr7g0305 385 Gene3D - 137 324 - -
Tpr7g0305 385 MobiDBLite consensus disorder prediction 51 105 - -
Tpr7g0305 385 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 379 - -
Tpr7g0305 385 SUPERFAMILY DNA-glycosylase 153 325 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0305 Tpr-Chr7 2469533 2474714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0305 K01247 - gmx:100790760 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0305 7 2469533 2474714 Tpr2g0987 2 11825098 11826594 ECH
Tpr7g0305 7 2469533 2474714 Tpr7g0305 7 2469533 2474714 ECH